RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 LOXL1Q08397 574 aaPredicted RBP19.3■□□□□ 0.68
SRRT-218ENST00000620394 B3GLCTQ6Y288 498 aa19.3■□□□□ 0.68
SRRT-218ENST00000620394 SERPINA11Q86U17 422 aa19.3■□□□□ 0.68
SRRT-218ENST00000620394 PIAS4Q8N2W9 510 aaPredicted RBP19.3■□□□□ 0.68
SRRT-218ENST00000620394 CADM2Q8N3J6 435 aa19.3■□□□□ 0.68
SRRT-218ENST00000620394 OR10H5Q8NGA6 315 aa19.3■□□□□ 0.68
SRRT-218ENST00000620394 ZNF385AQ96PM9 386 aaKnown RBP19.3■□□□□ 0.68
SRRT-218ENST00000620394 DHRS9Q9BPW9 319 aa19.3■□□□□ 0.68
SRRT-218ENST00000620394 C19orf24Q9BVV8 132 aa19.3■□□□□ 0.68
SRRT-218ENST00000620394 RAD21L1Q9H4I0 556 aa19.3■□□□□ 0.68
SRRT-218ENST00000620394 ARMC7Q9H6L4 198 aa19.3■□□□□ 0.68
SRRT-218ENST00000620394 B3GALT5Q9Y2C3 310 aa19.3■□□□□ 0.68
SRRT-218ENST00000620394 IFT52Q9Y366 437 aa19.3■□□□□ 0.68
SRRT-218ENST00000620394 ANK2Q01484 3957 aa19.3■□□□□ 0.68
SRRT-218ENST00000620394 TMEM247A6NEH6 219 aa19.29■□□□□ 0.68
SRRT-218ENST00000620394 NUDT7P0C024 238 aa19.29■□□□□ 0.68
SRRT-218ENST00000620394 BNIP2Q12982 314 aa19.29■□□□□ 0.68
SRRT-218ENST00000620394 LRIF1Q5T3J3 769 aa19.29■□□□□ 0.68
SRRT-218ENST00000620394 AGBL2Q5U5Z8 902 aa19.29■□□□□ 0.68
SRRT-218ENST00000620394 SLC22A25Q6T423 547 aa19.29■□□□□ 0.68
SRRT-218ENST00000620394 POMGNT2Q8NAT1 580 aa19.29■□□□□ 0.68
SRRT-218ENST00000620394 BBS10Q8TAM1 723 aa19.29■□□□□ 0.68
SRRT-218ENST00000620394 SHARPINQ9H0F6 387 aa19.29■□□□□ 0.68
SRRT-218ENST00000620394 CBLN4Q9NTU7 201 aa19.29■□□□□ 0.68
SRRT-218ENST00000620394 GMEB1Q9Y692 573 aa19.29■□□□□ 0.68
SRRT-218ENST00000620394 ALPK2Q86TB3 2170 aa19.28■□□□□ 0.68
SRRT-218ENST00000620394 ELOA3DA6NLF2 546 aaPredicted RBP19.28■□□□□ 0.68
SRRT-218ENST00000620394 M0R1B8 84 aa19.28■□□□□ 0.68
SRRT-218ENST00000620394 CLIC1O00299 241 aa19.28■□□□□ 0.68
SRRT-218ENST00000620394 VAMP5O95183 116 aa19.28■□□□□ 0.68
SRRT-218ENST00000620394 TGDSO95455 350 aa19.28■□□□□ 0.68
SRRT-218ENST00000620394 SLC25A16P16260 332 aa19.28■□□□□ 0.68
SRRT-218ENST00000620394 ELOA3BQ3SY89 546 aa19.28■□□□□ 0.68
SRRT-218ENST00000620394 C9orf135Q5VTT2 229 aa19.28■□□□□ 0.68
SRRT-218ENST00000620394 C1orf140Q5VVS0 124 aa19.28■□□□□ 0.68
SRRT-218ENST00000620394 ZNF544Q6NX49 715 aa19.28■□□□□ 0.68
SRRT-218ENST00000620394 SLC2A7Q6PXP3 512 aa19.28■□□□□ 0.68
SRRT-218ENST00000620394 C6orf89Q6UWU4 347 aa19.28■□□□□ 0.68
SRRT-218ENST00000620394 AAED1Q7RTV5 226 aa19.28■□□□□ 0.68
SRRT-218ENST00000620394 ELOA3Q8NG57 546 aa19.28■□□□□ 0.68
SRRT-218ENST00000620394 STK35Q8TDR2 534 aa19.28■□□□□ 0.68
SRRT-218ENST00000620394 TAPBPLQ9BX59 468 aa19.28■□□□□ 0.68
SRRT-218ENST00000620394 CACYBPQ9HB71 228 aaKnown RBP19.28■□□□□ 0.68
SRRT-218ENST00000620394 TCF7L2Q9NQB0 619 aa19.28■□□□□ 0.68
SRRT-218ENST00000620394 ZNF232Q9UNY5 417 aa19.28■□□□□ 0.68
SRRT-218ENST00000620394 FTCDNL1E5RQL4 147 aa19.27■□□□□ 0.68
SRRT-218ENST00000620394 ETS2P15036 469 aa19.27■□□□□ 0.68
SRRT-218ENST00000620394 NCF2P19878 526 aaPredicted RBP19.27■□□□□ 0.68
SRRT-218ENST00000620394 STX1BP61266 288 aa19.27■□□□□ 0.68
SRRT-218ENST00000620394 IRX1P78414 480 aaPredicted RBP19.27■□□□□ 0.68
SRRT-218ENST00000620394 ZNF311Q5JNZ3 666 aa19.27■□□□□ 0.68
SRRT-218ENST00000620394 FUNDC1Q8IVP5 155 aa19.27■□□□□ 0.68
SRRT-218ENST00000620394 MSRB3Q8IXL7 192 aa19.27■□□□□ 0.68
SRRT-218ENST00000620394 GOLGA6L1Q8N7Z2 621 aa19.27■□□□□ 0.68
SRRT-218ENST00000620394 MAL2Q969L2 176 aa19.27■□□□□ 0.68
SRRT-218ENST00000620394 CACNG6Q9BXT2 260 aa19.27■□□□□ 0.68
SRRT-218ENST00000620394 ADPRHL2Q9NX46 363 aa19.27■□□□□ 0.68
SRRT-218ENST00000620394 SLC25A37Q9NYZ2 338 aa19.27■□□□□ 0.68
SRRT-218ENST00000620394 POU2F3Q9UKI9 436 aa19.27■□□□□ 0.68
SRRT-218ENST00000620394 ARFGEF3Q5TH69 2177 aa19.27■□□□□ 0.68
SRRT-218ENST00000620394 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.26■□□□□ 0.674e-7■■■■■ 39.2
SRRT-218ENST00000620394 POLR3GO15318 223 aaPredicted RBP19.26■□□□□ 0.67
SRRT-218ENST00000620394 ZNF16P17020 682 aaPredicted RBP19.26■□□□□ 0.67
SRRT-218ENST00000620394 EGR4Q05215 589 aa19.26■□□□□ 0.67
SRRT-218ENST00000620394 BLOC1S3Q6QNY0 202 aa19.26■□□□□ 0.67
SRRT-218ENST00000620394 CREB3L2Q70SY1 520 aa19.26■□□□□ 0.67
SRRT-218ENST00000620394 ABHD12BQ7Z5M8 362 aaPredicted RBP19.26■□□□□ 0.67
SRRT-218ENST00000620394 GPAT4Q86UL3 456 aa19.26■□□□□ 0.67
SRRT-218ENST00000620394 MUC15Q8N387 334 aa19.26■□□□□ 0.67
SRRT-218ENST00000620394 MFSD8Q8NHS3 518 aa19.26■□□□□ 0.67
SRRT-218ENST00000620394 PTDSS2Q9BVG9 487 aa19.26■□□□□ 0.67
SRRT-218ENST00000620394 RSPO3Q9BXY4 272 aaPredicted RBP19.26■□□□□ 0.67
SRRT-218ENST00000620394 C12orf10Q9HB07 376 aa19.26■□□□□ 0.67
SRRT-218ENST00000620394 OBP2BQ9NPH6 170 aa19.26■□□□□ 0.67
SRRT-218ENST00000620394 SLC52A3Q9NQ40 469 aa19.26■□□□□ 0.67
SRRT-218ENST00000620394 RASD1Q9Y272 281 aa19.26■□□□□ 0.67
SRRT-218ENST00000620394 TRBV5-3A0A0A0MS03 114 aa19.25■□□□□ 0.67
SRRT-218ENST00000620394 H7C417 338 aa19.25■□□□□ 0.67
SRRT-218ENST00000620394 AHSA1O95433 338 aa19.25■□□□□ 0.67
SRRT-218ENST00000620394 ARAFP10398 606 aa19.25■□□□□ 0.67
SRRT-218ENST00000620394 PTNP21246 168 aa19.25■□□□□ 0.67
SRRT-218ENST00000620394 PRKAR1BP31321 381 aa19.25■□□□□ 0.67
SRRT-218ENST00000620394 PRPS1P60891 318 aa19.25■□□□□ 0.67
SRRT-218ENST00000620394 CYB5R2Q6BCY4 276 aa19.25■□□□□ 0.67
SRRT-218ENST00000620394 TMEM225Q6GV28 225 aa19.25■□□□□ 0.67
SRRT-218ENST00000620394 FBXL14Q8N1E6 418 aa19.25■□□□□ 0.67
SRRT-218ENST00000620394 DEPDC4Q8N2C3 294 aa19.25■□□□□ 0.67
SRRT-218ENST00000620394 CCDC28BQ9BUN5 200 aa19.25■□□□□ 0.67
SRRT-218ENST00000620394 FKRPQ9H9S5 495 aa19.25■□□□□ 0.67
SRRT-218ENST00000620394 SLCO1B3Q9NPD5 702 aa19.25■□□□□ 0.67
SRRT-218ENST00000620394 TMEM45AQ9NWC5 275 aa19.25■□□□□ 0.67
SRRT-218ENST00000620394 OR6C65A6NJZ3 312 aa19.24■□□□□ 0.67
SRRT-218ENST00000620394 WNT11O96014 354 aa19.24■□□□□ 0.67
SRRT-218ENST00000620394 SRD5A1P18405 259 aa19.24■□□□□ 0.67
SRRT-218ENST00000620394 SELENOPP49908 381 aa19.24■□□□□ 0.67
SRRT-218ENST00000620394 IDH3AP50213 366 aa19.24■□□□□ 0.67
SRRT-218ENST00000620394 KLHL24Q6TFL4 600 aa19.24■□□□□ 0.67
SRRT-218ENST00000620394 EPHX4Q8IUS5 362 aa19.24■□□□□ 0.67
SRRT-218ENST00000620394 LSMEM1Q8N8F7 131 aa19.24■□□□□ 0.67
SRRT-218ENST00000620394 FAM168AQ92567 244 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms