RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 LYSMD4Q5XG99 296 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 CNIH2Q6PI25 160 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 CD200R1LQ6Q8B3 271 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 OR7G1Q8NGA0 311 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 STT3BQ8TCJ2 826 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 DAZLQ92904 295 aaKnown RBP11.31□□□□□ -0.6
CIITA-212ENST00000618207 OR1F2PQ96R84 312 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 PDCD1LG2Q9BQ51 273 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 PELOQ9BRX2 385 aaKnown RBP11.31□□□□□ -0.6
CIITA-212ENST00000618207 RAB33BQ9H082 229 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 RNF32Q9H0A6 362 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 COPS3Q9UNS2 423 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 ZNF337Q9Y3M9 751 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 MMACHCQ9Y4U1 282 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 KIF26BQ2KJY2 2108 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 TVP23AA6NH52 213 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 RGS9O75916 674 aaPredicted RBP11.31□□□□□ -0.6
CIITA-212ENST00000618207 RPP14O95059 124 aaKnown RBP11.31□□□□□ -0.6
CIITA-212ENST00000618207 PAHP00439 452 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 SLC2A2P11168 524 aaPredicted RBP11.31□□□□□ -0.6
CIITA-212ENST00000618207 AHCYP23526 432 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 MINDY2Q8NBR6 621 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 MAFAQ8NHW3 353 aaPredicted RBP11.31□□□□□ -0.6
CIITA-212ENST00000618207 GHSRQ92847 366 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 OMA1Q96E52 524 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 SLC41A2Q96JW4 573 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 CTRCQ99895 268 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 PCED1AQ9H1Q7 454 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 MMP28Q9H239 520 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 APMAPQ9HDC9 416 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 SLC22A11Q9NSA0 550 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 GPR179Q6PRD1 2367 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 RALGAPA1Q6GYQ0 2036 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 A0A087WV48 116 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 ANKRD34BA5PLL1 514 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 CPNE3O75131 537 aaKnown RBP11.31□□□□□ -0.6
CIITA-212ENST00000618207 IFI6P09912 130 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 ABCD3P28288 659 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 GPLD1P80108 840 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 ALG10Q5BKT4 473 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 SLC29A4Q7RTT9 530 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 ATG4DQ86TL0 474 aaPredicted RBP11.31□□□□□ -0.6
CIITA-212ENST00000618207 CMIPQ8IY22 773 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 NPEPL1Q8NDH3 523 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 WWTR1Q9GZV5 400 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 DUSP15Q9H1R2 295 aaPredicted RBP11.31□□□□□ -0.6
CIITA-212ENST00000618207 SP140LQ9H930 580 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 ACOXLQ9NUZ1 547 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 ICAM5Q9UMF0 924 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 UGT2A1Q9Y4X1 527 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 FREM3P0C091 2139 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 PATE3B3GLJ2 98 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 DCTN6O00399 190 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 SIGLEC6O43699 453 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 SPI1P17947 270 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 NKX2-5P52952 324 aaPredicted RBP11.3□□□□□ -0.6
CIITA-212ENST00000618207 ZNF74Q16587 644 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 SLC35F2Q8IXU6 374 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 DUSP19Q8WTR2 217 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 AP3S1Q92572 193 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 TAAR8Q969N4 342 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 C8orf44Q96CB5 159 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 MED30Q96HR3 178 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 CNN2Q99439 309 aaKnown RBP11.3□□□□□ -0.6
CIITA-212ENST00000618207 LPAR4Q99677 370 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 ATF6BQ99941 703 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 AKIRIN1Q9H9L7 192 aaPredicted RBP11.3□□□□□ -0.6
CIITA-212ENST00000618207 ING1Q9UK53 422 aaPredicted RBP11.3□□□□□ -0.6
CIITA-212ENST00000618207 A0A0B4J203 849 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 A0A1W2PQM1 296 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 FRG2CA6NGY1 282 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 CDK2AP1O14519 115 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 PPM1BO75688 479 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 PTTG1O95997 202 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 CENPAP49450 140 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 CCL7P80098 99 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 LPAL2Q16609 132 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 ODF4Q2M2E3 257 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 RNASE12Q5GAN4 147 aaKnown RBP11.3□□□□□ -0.6
CIITA-212ENST00000618207 FNDC7Q5VTL7 733 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 GLCCI1Q86VQ1 547 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 JAZF1Q86VZ6 243 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 KDM8Q8N371 416 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 EID2Q8N6I1 236 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 ATOH1Q92858 354 aaPredicted RBP11.3□□□□□ -0.6
CIITA-212ENST00000618207 CLDN23Q96B33 292 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 MVB12AQ96EY5 273 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 OR11A1Q9GZK7 315 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 CPNE5Q9HCH3 593 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 MMP25Q9NPA2 562 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 NRIP3Q9NQ35 241 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 BAIAP2Q9UQB8 552 aa11.3□□□□□ -0.6
CIITA-212ENST00000618207 RTTNQ86VV8 2226 aa11.29□□□□□ -0.6
CIITA-212ENST00000618207 CSF3P09919 207 aa11.29□□□□□ -0.6
CIITA-212ENST00000618207 CXCR1P25024 350 aa11.29□□□□□ -0.6
CIITA-212ENST00000618207 RPL18Q07020 188 aaKnown RBP11.29□□□□□ -0.6
CIITA-212ENST00000618207 ACSM3Q53FZ2 586 aa11.29□□□□□ -0.6
CIITA-212ENST00000618207 DPY19L2P2Q6ZN68 376 aa11.29□□□□□ -0.6
CIITA-212ENST00000618207 ABHD4Q8TB40 342 aa11.29□□□□□ -0.6
CIITA-212ENST00000618207 PELI1Q96FA3 418 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms