RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 ASCC3Q8N3C0 2202 aaKnown RBP12.66□□□□□ -0.38
CBWD1-226ENST00000618061 TMEM265A0A087WTH1 108 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 A0A0B4J203 849 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 TTC36A6NLP5 189 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 NDUFB5O43674 189 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 TSPAN2O60636 221 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 PDGFBP01127 241 aaPredicted RBP12.66□□□□□ -0.38
CBWD1-226ENST00000618061 PNMTP11086 282 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 FOSL2P15408 326 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 CASP3P42574 277 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 RPS27P42677 84 aaKnown RBP12.66□□□□□ -0.38
CBWD1-226ENST00000618061 ACTC1P68032 377 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 ACTA1P68133 377 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 GPLD1P80108 840 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 RPL18Q07020 188 aaKnown RBP12.66□□□□□ -0.38
CBWD1-226ENST00000618061 DMKNQ6E0U4 476 aaPredicted RBP12.66□□□□□ -0.38
CBWD1-226ENST00000618061 SLITRK4Q8IW52 837 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 OR1N1Q8NGS0 311 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 OR2I1PQ8NGU4 316 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 DAZLQ92904 295 aaKnown RBP12.66□□□□□ -0.38
CBWD1-226ENST00000618061 COPS7AQ9UBW8 275 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 C11orf98E9PRG8 122 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 PLA2G10O15496 165 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 ZNF354AO60765 605 aaPredicted RBP12.66□□□□□ -0.38
CBWD1-226ENST00000618061 CPNE3O75131 537 aaKnown RBP12.66□□□□□ -0.38
CBWD1-226ENST00000618061 MTNR1BP49286 362 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 EVX1P49640 407 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 DIO1P49895 249 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 OR2B6P58173 313 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 SCN1BQ07699 218 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 BIKQ13323 160 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.66□□□□□ -0.38
CBWD1-226ENST00000618061 FAM69BQ5VUD6 431 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 FAM122BQ7Z309 247 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 AKAP14Q86UN6 197 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 Q8N402 240 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 LRRC75AQ8NAA5 344 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 SLC25A36Q96CQ1 311 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 FOXN4Q96NZ1 517 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 OR6C1Q96RD1 312 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 TBL1XR1Q9BZK7 514 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 PPP1R3EQ9H7J1 279 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 RASD1Q9Y272 281 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 PCDHGB2Q9Y5G2 931 aa12.66□□□□□ -0.38
CBWD1-226ENST00000618061 COL5A1P20908 1838 aaPredicted RBP12.65□□□□□ -0.38
CBWD1-226ENST00000618061 TVP23AA6NH52 213 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 GDF9O60383 454 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 CDC40O60508 579 aaKnown RBP eCLIP12.65□□□□□ -0.38
CBWD1-226ENST00000618061 PLGP00747 810 aaPredicted RBP12.65□□□□□ -0.38
CBWD1-226ENST00000618061 OR2T7P0C7T2 308 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 ASAH2BP0C7U1 165 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 F8A1P23610 371 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 ARRB1P49407 418 aaPredicted RBP12.65□□□□□ -0.38
CBWD1-226ENST00000618061 GDI2P50395 445 aaKnown RBP12.65□□□□□ -0.38
CBWD1-226ENST00000618061 PRPS1P60891 318 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 POU4F2Q12837 409 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 KRR1Q13601 381 aaKnown RBP12.65□□□□□ -0.38
CBWD1-226ENST00000618061 LINC01590Q5TEZ4 76 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 WDR74Q6RFH5 385 aaPredicted RBP12.65□□□□□ -0.38
CBWD1-226ENST00000618061 PRR23CQ6ZRP0 262 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 SLC29A4Q7RTT9 530 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 PRSS42Q7Z5A4 293 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 JAZF1Q86VZ6 243 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 ZBTB8BQ8NAP8 495 aaPredicted RBP12.65□□□□□ -0.38
CBWD1-226ENST00000618061 OR2T27Q8NH04 317 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 OR14A16Q8NHC5 309 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 STT3BQ8TCJ2 826 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 THAP4Q8WY91 577 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 TXNDC15Q96J42 360 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 NMNAT2Q9BZQ4 307 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 ZNF768Q9H5H4 540 aaKnown RBP12.65□□□□□ -0.38
CBWD1-226ENST00000618061 NCDNQ9UBB6 729 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 HIF3AQ9Y2N7 669 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 KLHDC2Q9Y2U9 406 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 CACNA1EQ15878 2313 aa12.65□□□□□ -0.38
CBWD1-226ENST00000618061 A0A0G2JMP0 313 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 TRBV2A0A0J9YWF9 115 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 A0A0X1KG70 313 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 A0A1W2PQM1 296 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 A8MV72 311 aaPredicted RBP12.64□□□□□ -0.39
CBWD1-226ENST00000618061 ARPC3O15145 178 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 EIF4EP06730 217 aaKnown RBP12.64□□□□□ -0.39
CBWD1-226ENST00000618061 EDNRAP25101 427 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 THBS2P35442 1172 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 NRG3P56975 720 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 CCL7P80098 99 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 GGTLC2Q14390 218 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 GDPD1Q8N9F7 314 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 C7orf57Q8NEG2 295 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 OR4M2Q8NGB6 313 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 SETD6Q8TBK2 473 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 HSD17B8Q92506 261 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 TSPAN32Q96QS1 320 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 OR14A2Q96R54 314 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 NPAS1Q99742 590 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 SOSTQ9BQB4 213 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 TMEM43Q9BTV4 400 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 ALG12Q9BV10 488 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 SLC19A3Q9BZV2 496 aa12.64□□□□□ -0.39
CBWD1-226ENST00000618061 LAT2Q9GZY6 243 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms