RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 CIARTQ8N365 385 aaPredicted RBP5.02□□□□□ -1.61
CPNE3-208ENST00000614678 MAPK1IP1LQ8NDC0 245 aa5.02□□□□□ -1.61
CPNE3-208ENST00000614678 WFDC11Q8NEX6 87 aa5.02□□□□□ -1.61
CPNE3-208ENST00000614678 OR9K2Q8NGE7 335 aa5.02□□□□□ -1.61
CPNE3-208ENST00000614678 OR6K3Q8NGY3 331 aa5.02□□□□□ -1.61
CPNE3-208ENST00000614678 PLPPR2Q96GM1 343 aa5.02□□□□□ -1.61
CPNE3-208ENST00000614678 NOX3Q9HBY0 568 aa5.02□□□□□ -1.61
CPNE3-208ENST00000614678 MAN2C1Q9NTJ4 1040 aa5.02□□□□□ -1.61
CPNE3-208ENST00000614678 EMC9Q9Y3B6 208 aa5.02□□□□□ -1.61
CPNE3-208ENST00000614678 C2CD3Q4AC94 2353 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 ARFGEF3Q5TH69 2177 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 RAI1Q7Z5J4 1906 aaPredicted RBP5.01□□□□□ -1.61
CPNE3-208ENST00000614678 IGKV1D-43A0A0B4J1Z2 117 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 ELOA3DA6NLF2 546 aaPredicted RBP5.01□□□□□ -1.61
CPNE3-208ENST00000614678 PDE5AO76074 875 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 SERPINA1P01009 418 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 KDELR2P33947 212 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 COPZ1P61923 177 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 MYBPC1Q00872 1141 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 ELOA3BQ3SY89 546 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 SFRP5Q5T4F7 317 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 DHRS4L2Q6PKH6 230 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 KBTBD8Q8NFY9 601 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 ELOA3Q8NG57 546 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 FGFBP3Q8TAT2 258 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 SLC38A4Q969I6 547 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 FOXN4Q96NZ1 517 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 ADAM21Q9UKJ8 722 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 IFT52Q9Y366 437 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 A0A087WUJ7 227 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 A8MVM7 634 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 hCG_2039718K7EN88 272 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 CLOCKO15516 846 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 ATP8B1O43520 1251 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 PMS2P2O95744 297 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 GUSBP08236 651 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 AHCYP23526 432 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 IDUAP35475 653 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 CLDN17P56750 224 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 PSME3P61289 254 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 CAMK2DQ13557 499 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 TMEM225Q6GV28 225 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 OR2A2Q6IF42 318 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 NIPAL3Q6P499 406 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 NHLRC1Q6VVB1 395 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 CYP2R1Q6VVX0 501 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 CREB3L2Q70SY1 520 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 KRTAP1-3Q8IUG1 177 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 CMIPQ8IY22 773 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 LSMEM1Q8N8F7 131 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 OR52J3Q8NH60 311 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 MOSPD2Q8NHP6 518 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 RP9Q8TA86 221 aaKnown RBP5.01□□□□□ -1.61
CPNE3-208ENST00000614678 GPA33Q99795 319 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 NELFAQ9H3P2 528 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 ALG2Q9H553 416 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 UBTD1Q9HAC8 227 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 SERINC1Q9NRX5 453 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 ADA2Q9NZK5 511 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 ZNF346Q9UL40 294 aaKnown RBP5.01□□□□□ -1.61
CPNE3-208ENST00000614678 A4GNTQ9UNA3 340 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 ANGPT4Q9Y264 503 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 AQP7P3A6NL99 342 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 LINC01387J3KSC0 135 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 BGLAPP02818 100 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 SOD3P08294 240 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 OR3A2P47893 321 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 ZNF83P51522 516 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 EEFSECP57772 596 aaKnown RBP5.01□□□□□ -1.61
CPNE3-208ENST00000614678 VLDLRP98155 873 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 IL1RL1Q01638 556 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 BSPH1Q075Z2 132 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 LINC00114Q6XXX2 140 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 CDH24Q86UP0 819 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 ZNF100Q8IYN0 542 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 C10orf53Q8N6V4 93 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 OR8J3Q8NGG0 315 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 DDIT4LQ96D03 193 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 C14orf79Q96F83 325 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 CDRT15Q96T59 188 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 SIKE1Q9BRV8 207 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 TAS2R5Q9NYW4 299 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 KLHL9Q9P2J3 617 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 KCNN3Q9UGI6 736 aa5.01□□□□□ -1.61
CPNE3-208ENST00000614678 ELOVL7A1L3X0 281 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 TMEM247A6NEH6 219 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 CXCR6O00574 342 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 CDC42EP2O14613 210 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 ZNF208O43345 1280 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 MAKP20794 623 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 MS4A2Q01362 244 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 POU3F1Q03052 451 aaPredicted RBP5□□□□□ -1.61
CPNE3-208ENST00000614678 FHL1Q13642 323 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 PAQR6Q6TCH4 344 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 SLC46A3Q7Z3Q1 461 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 ZNF433Q8N7K0 673 aaPredicted RBP5□□□□□ -1.61
CPNE3-208ENST00000614678 WDR31Q8NA23 367 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 SLC26A7Q8TE54 656 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 MS4A3Q96HJ5 214 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 CALML5Q9NZT1 146 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms