RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 KLF4O43474 513 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 AKR7A3O95154 331 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 OR6A2O95222 327 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 CASP6P55212 293 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 PON3Q15166 354 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 ZNF239Q16600 458 aaKnown RBP13.16□□□□□ -0.3
CD48-203ENST00000613788 ZBED5Q49AG3 693 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 SOWAHCQ53LP3 525 aaPredicted RBP13.16□□□□□ -0.3
CD48-203ENST00000613788 EMC4Q5J8M3 183 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 GTF2IRD2BQ6EKJ0 949 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 TMEM225Q6GV28 225 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 PPP4R4Q6NUP7 873 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 FAHD1Q6P587 224 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 CD300LDQ6UXZ3 194 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 ZBTB49Q6ZSB9 765 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 NANOGNBQ7Z5D8 188 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 GTF2IRD2Q86UP8 949 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 MEX3DQ86XN8 651 aaKnown RBP13.16□□□□□ -0.3
CD48-203ENST00000613788 SLC43A2Q8N370 569 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 ZNF843Q8N446 348 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 TMEM99Q8N816 258 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 ADPRHL1Q8NDY3 354 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 ZNF417Q8TAU3 575 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 UCN2Q96RP3 112 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 ZNF587Q96SQ5 575 aaPredicted RBP13.16□□□□□ -0.3
CD48-203ENST00000613788 GPA33Q99795 319 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 RBM4BQ9BQ04 359 aaKnown RBP13.16□□□□□ -0.3
CD48-203ENST00000613788 RBM4Q9BWF3 364 aaKnown RBP13.16□□□□□ -0.3
CD48-203ENST00000613788 UCK2Q9BZX2 261 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 TP63Q9H3D4 680 aaPredicted RBP13.16□□□□□ -0.3
CD48-203ENST00000613788 CALHM2Q9HA72 323 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 CHST11Q9NPF2 352 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 AQP7P3A6NL99 342 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 BLOC1S5-TXNDC5H3BN57 136 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 CASQ2O14958 399 aaPredicted RBP13.15□□□□□ -0.3
CD48-203ENST00000613788 VAMP5O95183 116 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 PRB1P04280 392 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 FCGR2AP12318 317 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 ACVR2AP27037 513 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 DAPP51397 102 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 PRPS1P60891 318 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 FCRLAQ7L513 359 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 P4HA3Q7Z4N8 544 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 ADGRE4PQ86SQ3 457 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 DOLPP1Q86YN1 238 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 EPHX4Q8IUS5 362 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 CBR4Q8N4T8 237 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 OR51A7Q8NH64 312 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 TRIB1Q96RU8 372 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 NIPSNAP1Q9BPW8 284 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 NDEL1Q9GZM8 345 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 SMURF2Q9HAU4 748 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 C8orf4Q9NR00 106 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 RASD1Q9Y272 281 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 HIF3AQ9Y2N7 669 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 DNAJC13O75165 2243 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 MED12Q93074 2177 aa13.15□□□□□ -0.3
CD48-203ENST00000613788 PRRC2CQ9Y520 2896 aaKnown RBP13.15□□□□□ -0.3
CD48-203ENST00000613788 SPENQ96T58 3664 aaKnown RBP13.15□□□□□ -0.31
CD48-203ENST00000613788 CD8B2A6NJW9 211 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 SLC22A20A6NK97 555 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 PLPP3O14495 311 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 SMAD9O15198 467 aaKnown RBP13.14□□□□□ -0.31
CD48-203ENST00000613788 PTP4A3O75365 173 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 RCBTB2O95199 551 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 ADORA3P0DMS8 318 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 TLE1Q04724 770 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 ZP4Q12836 540 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 DAG1Q14118 895 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 ACSF3Q4G176 576 aaPredicted RBP13.14□□□□□ -0.31
CD48-203ENST00000613788 NSUN5P2Q63ZY6 315 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 KDM4DQ6B0I6 523 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 RPL13AP3Q6NVV1 102 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 RASSF6Q6ZTQ3 369 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 GALNT11Q8NCW6 608 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 OR13C2Q8NGS9 318 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 FNDC9Q8TBE3 224 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 MAGEE2Q8TD90 523 aaPredicted RBP13.14□□□□□ -0.31
CD48-203ENST00000613788 ROBO4Q8WZ75 1007 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 WNT2BQ93097 391 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 TNFRSF13CQ96RJ3 184 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 PAPOLBQ9NRJ5 636 aaKnown RBP13.14□□□□□ -0.31
CD48-203ENST00000613788 KRT84Q9NSB2 600 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 ENOPH1Q9UHY7 261 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 SIGLEC7Q9Y286 467 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 POFUT2Q9Y2G5 429 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 IGSF10Q6WRI0 2623 aa13.14□□□□□ -0.31
CD48-203ENST00000613788 IGHV3-15A0A0B4J1V0 119 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 LOC102725191A0A1B0GVB3 256 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 MS4A18H0YCH9 400 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 EI24O14681 340 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 CYTIPO60759 359 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 TSPAN19P0C672 248 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 AHCYP23526 432 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 ALDH3A2P51648 485 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 RPS4XP62701 263 aaKnown RBP13.13□□□□□ -0.31
CD48-203ENST00000613788 PPP2R2BQ00005 443 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 IL1RL1Q01638 556 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 PUDPQ08623 228 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 RNPS1Q15287 305 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms