RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 CPED1A4D0V7 1026 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 FZD7O75084 574 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 HIST1H1CP16403 213 aaKnown RBP13.44□□□□□ -0.26
CDH1-213ENST00000612417 BTCP35070 178 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 GPR143P51810 404 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 GPLD1P80108 840 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 IGLV3-21P80748 117 aaPredicted RBP13.44□□□□□ -0.26
CDH1-213ENST00000612417 MAB21L1Q13394 359 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 CDK5R1Q15078 307 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 SLC25A35Q3KQZ1 300 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 CDONQ4KMG0 1287 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 TCTE1Q5JU00 501 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 KIRREL2Q6UWL6 708 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 GPR135Q8IZ08 494 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 METTL27Q8N6F8 245 aaPredicted RBP13.44□□□□□ -0.26
CDH1-213ENST00000612417 OR4N2Q8NGD1 307 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 OR52E2Q8NGJ4 325 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 HAVCR2Q8TDQ0 301 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 PELI1Q96FA3 418 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 CNN2Q99439 309 aaKnown RBP13.44□□□□□ -0.26
CDH1-213ENST00000612417 GAREM1Q9H706 876 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 ABRACLQ9P1F3 81 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 CACNG2Q9Y698 323 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 SEC16AO15027 2179 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 EFCAB7A8K855 629 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 NOTOA8MTQ0 251 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 FOXS1O43638 330 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 GATBO75879 557 aaKnown RBP13.44□□□□□ -0.26
CDH1-213ENST00000612417 GABRA4P48169 554 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 PSMD4P55036 377 aaKnown RBP13.44□□□□□ -0.26
CDH1-213ENST00000612417 HSD11B2P80365 405 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 CFHR1Q03591 330 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 ISXQ2M1V0 245 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 ZC3H14Q6PJT7 736 aaKnown RBP13.44□□□□□ -0.26
CDH1-213ENST00000612417 RFLNBQ8N5W9 214 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 SMAP2Q8WU79 429 aaPredicted RBP13.44□□□□□ -0.26
CDH1-213ENST00000612417 RIT1Q92963 219 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 MMABQ96EY8 250 aaPredicted RBP13.44□□□□□ -0.26
CDH1-213ENST00000612417 MED30Q96HR3 178 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 MKKSQ9NPJ1 570 aaPredicted RBP13.44□□□□□ -0.26
CDH1-213ENST00000612417 KLHL1Q9NR64 748 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 WDFY4Q6ZS81 3184 aa13.44□□□□□ -0.26
CDH1-213ENST00000612417 MPDZO75970 2070 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 C7orf66A4D0T2 115 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 BLACEA4D250 179 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 ARL6IP5O75915 188 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 UBL3O95164 117 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 UCHL1P09936 223 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 RNH1P13489 461 aaKnown RBP13.43□□□□□ -0.26
CDH1-213ENST00000612417 CD1CP29017 333 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 GDI2P50395 445 aaKnown RBP13.43□□□□□ -0.26
CDH1-213ENST00000612417 MMP15P51511 669 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 GBX2P52951 348 aaPredicted RBP13.43□□□□□ -0.26
CDH1-213ENST00000612417 MAT1AQ00266 395 aaKnown RBP13.43□□□□□ -0.26
CDH1-213ENST00000612417 FAM53BQ14153 422 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 NR0B2Q15466 257 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 SLC36A2Q495M3 483 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 CCDC58Q4VC31 144 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 NPSR1Q6W5P4 371 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 SDR9C7Q8NEX9 313 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 OR14A16Q8NHC5 309 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 SAP25Q8TEE9 199 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 THAP4Q8WY91 577 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 ZMYND19Q96E35 227 aaPredicted RBP13.43□□□□□ -0.26
CDH1-213ENST00000612417 SGTBQ96EQ0 304 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 G6PC3Q9BUM1 346 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 CAPN10Q9HC96 672 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 GALNT9Q9HCQ5 603 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 A0A087WUJ7 227 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 A0A1W2PRG6 482 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 SYNDIG1LA6NDD5 238 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 TMEM150CB9EJG8 249 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 MCIDASD6RGH6 385 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 TGFBR3LH3BV60 316 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 AGRPO00253 132 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 ARPC3O15145 178 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 EEF1E1O43324 174 aaKnown RBP13.43□□□□□ -0.26
CDH1-213ENST00000612417 PPM1BO75688 479 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 OR2B3O76000 313 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 EPXP11678 715 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 CSF2RBP32927 897 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 RPS11P62280 158 aaKnown RBP eCLIP13.43□□□□□ -0.26
CDH1-213ENST00000612417 SIRPAP78324 504 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 LGALS3BPQ08380 585 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 GRM7Q14831 915 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 TP53I3Q53FA7 332 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 CEP78Q5JTW2 689 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 SLC35D3Q5M8T2 416 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 RPL22L1Q6P5R6 122 aaKnown RBP13.43□□□□□ -0.26
CDH1-213ENST00000612417 BAIAP2L2Q6UXY1 529 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 DPY19L2P2Q6ZN68 376 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 ASB18Q6ZVZ8 466 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 SLITRK4Q8IW52 837 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 SLC35F2Q8IXU6 374 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 FAM98AQ8NCA5 519 aaKnown RBP13.43□□□□□ -0.26
CDH1-213ENST00000612417 RCBTB1Q8NDN9 531 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 OR13C5Q8NGS8 318 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 OR4K13Q8NH42 304 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 PHYHIPQ92561 330 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 ZNF285Q96NJ3 590 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms