RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 Q3ZCU0 254 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 TP53I3Q53FA7 332 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 C10orf120Q5SQS8 335 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 CCDC137Q6PK04 289 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 WDR74Q6RFH5 385 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 SCARA5Q6ZMJ2 495 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 C12orf56Q8IXR9 622 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 ZNF100Q8IYN0 542 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 ATP6V0D2Q8N8Y2 350 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 ANKFN1Q8N957 763 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 BBS1Q8NFJ9 593 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 CLHC1Q8NHS4 586 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 LINC01006Q8NI28 216 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 ERMNQ8TAM6 284 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 RLN3Q8WXF3 142 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 STARD8Q92502 1023 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 ZNF707Q96C28 371 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 PELI1Q96FA3 418 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 TUBGCP2Q9BSJ2 902 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 VCX2Q9H322 139 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 PSTPIP2Q9H939 334 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 UCK1Q9HA47 277 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 TMEM165Q9HC07 324 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 NRBP2Q9NSY0 501 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 SIGLEC8Q9NYZ4 499 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 MTRF1LQ9UGC7 380 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 DCDC2Q9UHG0 476 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 GABRR3A8MPY1 467 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 SPECC1L-ADORA2AF8WAN1 911 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 K7N7A8 449 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 PRRG1O14668 218 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 ZNF264O43296 627 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 B4GALT2O60909 372 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 CIB2O75838 187 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 RHOBTB1O94844 696 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 LGI1O95970 557 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 HNF1AP20823 631 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 AQP1P29972 269 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 LEPP41159 167 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 P2RY1P47900 373 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 PLK1P53350 603 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 SUCLG1P53597 346 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 HSPA2P54652 639 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 BASP1P80723 227 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 DNAJC3Q13217 504 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 COTL1Q14019 142 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 GNA13Q14344 377 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 TRIM16LQ309B1 348 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 SLC25A52Q3SY17 297 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 SMUG1Q53HV7 270 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 ARMC12Q5T9G4 340 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 TMEM225Q6GV28 225 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 KDM7AQ6ZMT4 941 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 ARCQ7LC44 396 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 TGIF2LYQ8IUE0 185 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 ZNF683Q8IZ20 524 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 CLEC4FQ8N1N0 589 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 SVOPLQ8N434 492 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 RNF10Q8N5U6 811 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 TMEM252Q8N6L7 170 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 ALLCQ8N6M5 410 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 TRPV1Q8NER1 839 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 OR4D5Q8NGN0 318 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 OR1F12Q8NHA8 337 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 PHOSPHO2Q8TCD6 241 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 MRPS31Q92665 395 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 ZIM3Q96PE6 472 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 TECTBQ96PL2 329 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 SLC35A5Q9BS91 424 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 TRIM62Q9BVG3 475 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 SMYD3Q9H7B4 428 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 PDFQ9HBH1 243 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 MARCH5Q9NX47 278 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 CD274Q9NZQ7 290 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 ERVW-1Q9UQF0 538 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 RASD1Q9Y272 281 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 PPIL1Q9Y3C6 166 aa3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 AK6Q9Y3D8 172 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-213ENST00000609587 SBNO1A3KN83 1393 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 METTL21EPA6NDL7 271 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 VSTM2BA6NLU5 285 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 GOLGA8SH3BPF8 625 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 TAPBPO15533 448 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 SNNO75324 88 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 KLHL2O95198 593 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 TGM6O95932 706 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 CSTAP01040 98 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 IGHV3-48P01763 117 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 GLAP06280 429 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 POLR2EP19388 210 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 ANXA13P27216 316 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 FGF9P31371 208 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 RORAP35398 523 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 BTDP43251 543 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 CRYBB1P53674 252 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 PPIDQ08752 370 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 GANABQ14697 944 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 EOGTQ5NDL2 527 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 CDR2LQ86X02 465 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 DNAAF3Q8N9W5 541 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms