RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 STAB1Q9NY15 2570 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 IGHV4-61A0A0C4DH41 118 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 A8MVM7 634 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 NR5A2O00482 541 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 FAAHO00519 579 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 RFXANKO14593 260 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 SNUPNO95149 360 aaKnown RBP12.95□□□□□ -0.34
CTSA-216ENST00000607212 AHSA1O95433 338 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 BCHEP06276 602 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 PGRP06401 933 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 OR4A8P0C604 315 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 LARS2Q15031 903 aaKnown RBP12.95□□□□□ -0.34
CTSA-216ENST00000607212 SWI5Q1ZZU3 235 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 C1orf140Q5VVS0 124 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 LIPNQ5VXI9 398 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 NXNQ6DKJ4 435 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 ZNF540Q8NDQ6 660 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 ZBTB9Q96C00 473 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 KATNB1Q9BVA0 655 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 PRR14Q9BWN1 585 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 ARMC7Q9H6L4 198 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 DYNLRB1Q9NP97 96 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 CALML5Q9NZT1 146 aa12.95□□□□□ -0.34
CTSA-216ENST00000607212 OR6C65A6NJZ3 312 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 FRS3O43559 492 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 UPK3AO75631 287 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 VAMP5O95183 116 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 SRP14P37108 136 aaKnown RBP12.94□□□□□ -0.34
CTSA-216ENST00000607212 CRISP3P54108 245 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 CLDN17P56750 224 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 NAAAQ02083 359 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 LRRC74AQ0VAA2 488 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 NPRL3Q12980 569 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 SQLEQ14534 574 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 MST1LQ2TV78 715 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 ZIC4Q8N9L1 334 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 TEX37Q96LM6 180 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 SORT1Q99523 831 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 BPESC1Q9GZL8 116 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 C20orf27Q9GZN8 174 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 ADAM19Q9H013 955 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 PIF1Q9H611 641 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 MEAF6Q9HAF1 191 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 AIG1Q9NVV5 245 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 RPS6KB2Q9UBS0 482 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 ZNF232Q9UNY5 417 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 RASD1Q9Y272 281 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 ZNF443Q9Y2A4 671 aaPredicted RBP12.94□□□□□ -0.34
CTSA-216ENST00000607212 CUBNO60494 3623 aa12.94□□□□□ -0.34
CTSA-216ENST00000607212 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.93□□□□□ -0.345e-9■■■■□ 23.8
CTSA-216ENST00000607212 SH3PXD2BA1X283 911 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 LRP5LA4QPB2 252 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 CDHR4A6H8M9 788 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 VWC2LB2RUY7 222 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 hCG_2039718K7EN88 272 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 TM9SF1O15321 606 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 RRP9O43818 475 aaKnown RBP12.93□□□□□ -0.34
CTSA-216ENST00000607212 ALDOCP09972 364 aaKnown RBP12.93□□□□□ -0.34
CTSA-216ENST00000607212 CECR9P0C854 216 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 KITP10721 976 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 ZNF23P17027 643 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 ZNF43P17038 809 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 RPS4Y1P22090 263 aaKnown RBP12.93□□□□□ -0.34
CTSA-216ENST00000607212 PAX7P23759 505 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 IDH3GP51553 393 aaPredicted RBP12.93□□□□□ -0.34
CTSA-216ENST00000607212 DSTNP60981 165 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 ROR2Q01974 943 aaKnown RBP12.93□□□□□ -0.34
CTSA-216ENST00000607212 C1DQ13901 141 aaKnown RBP12.93□□□□□ -0.34
CTSA-216ENST00000607212 CR1LQ2VPA4 569 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 RPS26P11Q5JNZ5 115 aaPredicted RBP12.93□□□□□ -0.34
CTSA-216ENST00000607212 HHATQ5VTY9 493 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 ANKRD16Q6P6B7 361 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 CREB3L2Q70SY1 520 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 SPATA21Q7Z572 469 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 KDM8Q8N371 416 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 GPR137CQ8N3F9 429 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 ANKRD42Q8N9B4 389 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 OR4F15Q8NGB8 312 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 RNF217Q8TC41 542 aa12.93□□□□□ -0.34
CTSA-216ENST00000607212 A0A096LPI6 279 aa12.92□□□□□ -0.34
CTSA-216ENST00000607212 SLC43A1O75387 559 aa12.92□□□□□ -0.34
CTSA-216ENST00000607212 PDE5AO76074 875 aa12.92□□□□□ -0.34
CTSA-216ENST00000607212 TFPTP0C1Z6 253 aa12.92□□□□□ -0.34
CTSA-216ENST00000607212 ETFAP13804 333 aa12.92□□□□□ -0.34
CTSA-216ENST00000607212 DAOP14920 347 aa12.92□□□□□ -0.34
CTSA-216ENST00000607212 NPR2P20594 1047 aa12.92□□□□□ -0.34
CTSA-216ENST00000607212 APEX1P27695 318 aaKnown RBP12.92□□□□□ -0.34
CTSA-216ENST00000607212 IL12AP29459 219 aa12.92□□□□□ -0.34
CTSA-216ENST00000607212 RPS5P46782 204 aaKnown RBP12.92□□□□□ -0.34
CTSA-216ENST00000607212 PPOXP50336 477 aa12.92□□□□□ -0.34
CTSA-216ENST00000607212 CHN2P52757 468 aa12.92□□□□□ -0.34
CTSA-216ENST00000607212 ADIPOQQ15848 244 aa12.92□□□□□ -0.34
CTSA-216ENST00000607212 C6orf10Q5SRN2 563 aa12.92□□□□□ -0.34
CTSA-216ENST00000607212 AP1ARQ63HQ0 302 aa12.92□□□□□ -0.34
CTSA-216ENST00000607212 SVOPLQ8N434 492 aa12.92□□□□□ -0.34
CTSA-216ENST00000607212 AENQ8WTP8 325 aaKnown RBP12.92□□□□□ -0.34
CTSA-216ENST00000607212 BCL2L2Q92843 193 aaPredicted RBP12.92□□□□□ -0.34
CTSA-216ENST00000607212 RMND5AQ9H871 391 aa12.92□□□□□ -0.34
CTSA-216ENST00000607212 MOV10Q9HCE1 1003 aaKnown RBP12.92□□□□□ -0.34
CTSA-216ENST00000607212 ARPC4-TTLL3A0A0A6YYG9 625 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms