RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 AKAP6Q13023 2319 aa10.81□□□□□ -0.68
CTSA-210ENST00000606000 MED13LQ71F56 2210 aa10.81□□□□□ -0.68
CTSA-210ENST00000606000 F8P00451 2351 aa10.81□□□□□ -0.68
CTSA-210ENST00000606000 ZNF469Q96JG9 3925 aaPredicted RBP10.8□□□□□ -0.68
CTSA-210ENST00000606000 A0A0B4J2E0 115 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 LOC100653049A0A140TA62 436 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 A0A1B0GX12 115 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 PRORSD1PA6NEY8 169 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 LRRN3E7EW58 273 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 M0R082 166 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 MRASO14807 208 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 SERPINB7O75635 380 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 KRT34O76011 436 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 CDH2P19022 906 aaPredicted RBP10.8□□□□□ -0.68
CTSA-210ENST00000606000 CD247P20963 164 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 PCGF2P35227 344 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 ZNF83P51522 516 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 LTBQ06643 244 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 RBBP4Q09028 425 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 NIPAL3Q6P499 406 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 WDR88Q6ZMY6 472 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 CREB3L2Q70SY1 520 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 POU5F2Q8N7G0 328 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 ZNF611Q8N823 705 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 WDR31Q8NA23 367 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 OR6T1Q8NGN1 323 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 MFSD8Q8NHS3 518 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 ZNF417Q8TAU3 575 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 PIGTQ969N2 578 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 LRRC58Q96CX6 371 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 ALKBH3Q96Q83 286 aaPredicted RBP10.8□□□□□ -0.68
CTSA-210ENST00000606000 ZNF587Q96SQ5 575 aaPredicted RBP10.8□□□□□ -0.68
CTSA-210ENST00000606000 PIP5K1AQ99755 562 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 SMR3AQ99954 134 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 SF3B5Q9BWJ5 86 aaKnown RBP10.8□□□□□ -0.68
CTSA-210ENST00000606000 TRIM2Q9C040 744 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 SLCO5A1Q9H2Y9 848 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 CCDC134Q9H6E4 229 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 ESRP2Q9H6T0 727 aaKnown RBP10.8□□□□□ -0.68
CTSA-210ENST00000606000 KLHL14Q9P2G3 628 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 GMPR2Q9P2T1 348 aaKnown RBP10.8□□□□□ -0.68
CTSA-210ENST00000606000 B3GAT1Q9P2W7 334 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 SLC13A4Q9UKG4 626 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 SLC25A15Q9Y619 301 aa10.8□□□□□ -0.68
CTSA-210ENST00000606000 SPG11Q96JI7 2443 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 DSCAMO60469 2012 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 CPSF4LA6NMK7 179 aaKnown RBP10.79□□□□□ -0.68
CTSA-210ENST00000606000 SHISA9B4DS77 424 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 ABCD4O14678 606 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 UPK3AO75631 287 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 LGI1O95970 557 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 THY1P04216 161 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 SOD3P08294 240 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 TNFRSF1BP20333 461 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 GTF2E2P29084 291 aaKnown RBP10.79□□□□□ -0.68
CTSA-210ENST00000606000 GRPRP30550 384 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 MDH1P40925 334 aaKnown RBP10.79□□□□□ -0.68
CTSA-210ENST00000606000 PTH2RP49190 550 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 CDH12P55289 794 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 CLDN17P56750 224 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 NRF1Q16656 503 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 VMACQ2NL98 169 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 MMEL1Q495T6 779 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 ZNF672Q499Z4 452 aaPredicted RBP10.79□□□□□ -0.68
CTSA-210ENST00000606000 HIKESHIQ53FT3 197 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 ULK3Q6PHR2 472 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 CALHM3Q86XJ0 350 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 WDFY1Q8IWB7 410 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 DNAJA4Q8WW22 397 aaPredicted RBP10.79□□□□□ -0.68
CTSA-210ENST00000606000 SLC38A4Q969I6 547 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 MUCL1Q96DR8 90 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 Q96MF0 132 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 MUS81Q96NY9 551 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 MOGAT1Q96PD6 335 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 ZNF317Q96PQ6 595 aaPredicted RBP10.79□□□□□ -0.68
CTSA-210ENST00000606000 MCHR1Q99705 422 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 AMBRA1Q9C0C7 1298 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 C12orf10Q9HB07 376 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 PARPBPQ9NWS1 579 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 LAMP3Q9UQV4 416 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 HIVEP1P15822 2718 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 ABCA4P78363 2273 aa10.79□□□□□ -0.68
CTSA-210ENST00000606000 TRAV36DV7A0A075B6V5 113 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 A0A087WUJ7 227 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 M0R1B8 84 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 FZD7O75084 574 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 LYPD3O95274 346 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 HPRP00739 348 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 BGLAPP02818 100 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 HLA-DOBP13765 273 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 CDKN1AP38936 164 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 GYS2P54840 703 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 CYLC2Q14093 348 aaPredicted RBP10.78□□□□□ -0.68
CTSA-210ENST00000606000 PGGHGQ32M88 737 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 ENTPD8Q5MY95 495 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 FAM69AQ5T7M9 428 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 FAM91A1Q658Y4 838 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 B3GLCTQ6Y288 498 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 YTHDF3Q7Z739 585 aaKnown RBP10.78□□□□□ -0.68
CTSA-210ENST00000606000 RANBP3LQ86VV4 465 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms