RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 MYCBPQ99417 103 aaPredicted RBP11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 MND1Q9BWT6 205 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 TAPBPLQ9BX59 468 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ISYNA1Q9NPH2 558 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ALKBH4Q9NXW9 302 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ERGIC3Q9Y282 383 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 TRAPPC4Q9Y296 219 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 B3GALT5Q9Y2C3 310 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 HDGFL3Q9Y3E1 203 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CUL9Q8IWT3 2517 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 A0A1W2PNV4 684 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 GJE1A6NN92 205 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 DNPH1O43598 174 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 NOL3O60936 208 aaKnown RBP11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 IGHA1P01876 353 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 STSP08842 583 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ADORA3P0DMS8 318 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 MYL12AP19105 171 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CNR1P21554 472 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 IDUAP35475 653 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 RPS5P46782 204 aaKnown RBP11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 GP2P55259 537 aaKnown RBP11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 RPL18Q07020 188 aaKnown RBP11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 LGALS3BPQ08380 585 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ITGADQ13349 1161 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 C1DQ13901 141 aaKnown RBP11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 FCRLBQ6BAA4 426 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ARSKQ6UWY0 536 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ANKRD13BQ86YJ7 626 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CPOQ8IVL8 374 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 BEST3Q8N1M1 668 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 SIRT6Q8N6T7 355 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 C10orf53Q8N6V4 93 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 LRRC17Q8N6Y2 441 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 AMER2Q8N7J2 671 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 POMGNT2Q8NAT1 580 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 POC1BQ8TC44 478 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 LGALS12Q96DT0 336 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 RNFT2Q96EX2 444 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 COG8Q96MW5 612 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 UTP23Q9BRU9 249 aaKnown RBP11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 RHNO1Q9BSD3 238 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 KATNB1Q9BVA0 655 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 NMNAT2Q9BZQ4 307 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ENKD1Q9H0I2 346 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 STMN3Q9NZ72 180 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 BOKQ9UMX3 212 aaPredicted RBP11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 MOKQ9UQ07 419 aa11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 MRPS18BQ9Y676 258 aaKnown RBP11.1□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 LOC102725191A0A1B0GVB3 256 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 LIPT2A6NK58 231 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 C17orf51A8MQB3 221 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 AHCYL1O43865 530 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 PMS2P2O95744 297 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 PTNP21246 168 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ITGA3P26006 1051 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 DPP4P27487 766 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 GTF2E2P29084 291 aaKnown RBP11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 C21orf33P30042 268 aaPredicted RBP11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 AQP2P41181 271 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ACTC1P68032 377 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ACTA1P68133 377 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 TBC1D25Q3MII6 688 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 PRAMEF20Q5VT98 475 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 OR5M10Q6IEU7 315 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 B3GNT6Q6ZMB0 384 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ASB18Q6ZVZ8 466 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 HDDC2Q7Z4H3 204 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 NANOGP1Q8N7R0 232 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 SLC37A3Q8NCC5 494 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 OR52I1Q8NGK6 324 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 KCNE4Q8WWG9 221 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 TMIGD2Q96BF3 282 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 DDOQ99489 341 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 FAM173AQ9BQD7 235 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 PIGQQ9BRB3 760 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 AMBNQ9NP70 447 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 INIPQ9NRY2 104 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CHCHD3Q9NX63 227 aaKnown RBP11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 TAS2R5Q9NYW4 299 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 PTTG2Q9NZH5 202 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 LRFN1Q9P244 771 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 FBXL2Q9UKC9 423 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 VDAC3Q9Y277 283 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 GPR52Q9Y2T5 361 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 LSM2Q9Y333 95 aaKnown RBP11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 PCDHGB7Q9Y5F8 929 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 IER3IP1Q9Y5U9 82 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 COMMD3-BMI1R4GMX3 469 aa11.09□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ZC3H12DA2A288 527 aaKnown RBP11.08□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 A6NIZ1 184 aa11.08□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ZNF891A8MT65 544 aaPredicted RBP11.08□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 LRRN3E7EW58 273 aa11.08□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 BLOC1S5-TXNDC5H3BN57 136 aa11.08□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 J3QRE1 110 aa11.08□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 PLPP3O14495 311 aa11.08□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 GABARAPO95166 117 aa11.08□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 SLC2A10O95528 541 aa11.08□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 HIST1H1CP16403 213 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms