RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 TEFMQ96QE5 360 aaKnown RBP14.17□□□□□ -0.14
PPFIA3-206ENST00000602655 MRPS30Q9NP92 439 aaKnown RBP14.17□□□□□ -0.14
PPFIA3-206ENST00000602655 TRPC4Q9UBN4 977 aa14.17□□□□□ -0.14
PPFIA3-206ENST00000602655 A0A1W2PS29 197 aa14.17□□□□□ -0.14
PPFIA3-206ENST00000602655 LIMS3P0CW19 117 aa14.17□□□□□ -0.14
PPFIA3-206ENST00000602655 LIMS4P0CW20 117 aa14.17□□□□□ -0.14
PPFIA3-206ENST00000602655 CNR1P21554 472 aa14.17□□□□□ -0.14
PPFIA3-206ENST00000602655 METRNLQ641Q3 311 aa14.17□□□□□ -0.14
PPFIA3-206ENST00000602655 HEPHL1Q6MZM0 1159 aa14.17□□□□□ -0.14
PPFIA3-206ENST00000602655 IQCHQ86VS3 1027 aa14.17□□□□□ -0.14
PPFIA3-206ENST00000602655 SNX33Q8WV41 574 aa14.17□□□□□ -0.14
PPFIA3-206ENST00000602655 C3orf49Q96BT1 292 aa14.17□□□□□ -0.14
PPFIA3-206ENST00000602655 C14orf79Q96F83 325 aa14.17□□□□□ -0.14
PPFIA3-206ENST00000602655 OR2M4Q96R27 311 aa14.17□□□□□ -0.14
PPFIA3-206ENST00000602655 ARHGAP9Q9BRR9 750 aa14.17□□□□□ -0.14
PPFIA3-206ENST00000602655 TTTY10Q9BZA0 68 aa14.17□□□□□ -0.14
PPFIA3-206ENST00000602655 FN3KQ9H479 309 aa14.17□□□□□ -0.14
PPFIA3-206ENST00000602655 GPX4P36969 197 aaPredicted RBP14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 RPL3P39023 403 aaKnown RBP14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 RIPPLY1Q0D2K3 151 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 NR2C2APQ86WQ0 139 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 PRSS58Q8IYP2 241 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 CAMKVQ8NCB2 501 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 THAP4Q8WY91 577 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 FNDC11Q9BVV2 318 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 GAREM1Q9H706 876 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 TMEM218A2RU14 115 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 HIST1H2ABP04908 130 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 ACP2P11117 423 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 PTHLHP12272 177 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 DRD1P21728 446 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 HTR2AP28223 471 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 NPBWR1P48145 328 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 WNT3P56703 355 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 ILF3Q12906 894 aaKnown RBP eCLIP14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 RNF212Q495C1 297 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 SEZ6L2Q6UXD5 910 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 HIST3H2AQ7L7L0 130 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 ZNF546Q86UE3 836 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 OR1S2Q8NGQ3 325 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 HIST1H2ACQ93077 130 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 NECAB3Q96P71 396 aaPredicted RBP14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 C1QTNF2Q9BXJ5 285 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 POLDIP3Q9BY77 421 aaKnown RBP14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 EGLN3Q9H6Z9 239 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 PIPOXQ9P0Z9 390 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 ZNF629Q9UEG4 869 aaPredicted RBP14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 KLF15Q9UIH9 416 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 PCDHB10Q9UN67 800 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 DTX4Q9Y2E6 619 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 GPR37O15354 613 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 DPTQ07507 201 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 ZNF385BQ569K4 471 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 B3GNTL1Q67FW5 361 aaPredicted RBP14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 PAQR8Q8TEZ7 354 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 PPCDCQ96CD2 204 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 CHRDQ9H2X0 955 aa14.16□□□□□ -0.14
PPFIA3-206ENST00000602655 A0A1W2PRB8 838 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 F5H5P2 479 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 PRICKLE3O43900 615 aaPredicted RBP14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 RGS9O75916 674 aaPredicted RBP14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 ANXA2P07355 339 aaKnown RBP14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 PRF1P14222 555 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 DLX5P56178 289 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 LSM11P83369 360 aaKnown RBP eCLIP14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 RAB40BQ12829 278 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 C4orf46Q504U0 113 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 ZNF433Q8N7K0 673 aaPredicted RBP14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 RNASE11Q8TAA1 199 aaKnown RBP14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 DDX31Q9H8H2 851 aaKnown RBP14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 RNF215Q9Y6U7 377 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 WDFY3Q8IZQ1 3526 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 TMEM129A0AVI4 362 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 PRODHO43272 600 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 PRAF2O60831 178 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 BCHEP06276 602 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 CD2P06729 351 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 HNRNPA2B1P22626 353 aaKnown RBP14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 TNFRSF4P43489 277 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 LIM2P55344 173 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 HBA1P69905 142 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 CHAF1BQ13112 559 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 SKP2Q13309 424 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 TDGQ13569 410 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 RPE65Q16518 533 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 DEFB133Q30KQ1 61 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 DEFB134Q4QY38 66 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 EOGTQ5NDL2 527 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 SLC36A4Q6YBV0 504 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 SLC29A4Q7RTT9 530 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 DPPA2Q7Z7J5 298 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 NAXDQ8IW45 347 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 OR4D9Q8NGE8 314 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 OR5K2Q8NHB8 316 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 AIF1LQ9BQI0 150 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 TCEAL7Q9BRU2 100 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 SLC25A32Q9H2D1 315 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 ZNF282Q9UDV7 671 aaPredicted RBP14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 RP1P56715 2156 aa14.15□□□□□ -0.14
PPFIA3-206ENST00000602655 HEATR5BQ9P2D3 2071 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms