RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 TMEM249Q2WGJ8 235 aa14.84□□□□□ -0.03
SCAF1-204ENST00000601038 CHRFAM7AQ494W8 412 aa14.84□□□□□ -0.03
SCAF1-204ENST00000601038 HIKESHIQ53FT3 197 aa14.84□□□□□ -0.03
SCAF1-204ENST00000601038 RPS26P11Q5JNZ5 115 aaPredicted RBP14.84□□□□□ -0.03
SCAF1-204ENST00000601038 C6orf10Q5SRN2 563 aa14.84□□□□□ -0.03
SCAF1-204ENST00000601038 MAVSQ7Z434 540 aa14.84□□□□□ -0.03
SCAF1-204ENST00000601038 SERPINA11Q86U17 422 aa14.84□□□□□ -0.03
SCAF1-204ENST00000601038 STK35Q8TDR2 534 aa14.84□□□□□ -0.03
SCAF1-204ENST00000601038 SLC35B4Q969S0 331 aa14.84□□□□□ -0.03
SCAF1-204ENST00000601038 C3orf49Q96BT1 292 aa14.84□□□□□ -0.03
SCAF1-204ENST00000601038 NKIRAS1Q9NYS0 192 aa14.84□□□□□ -0.03
SCAF1-204ENST00000601038 MOKQ9UQ07 419 aa14.84□□□□□ -0.03
SCAF1-204ENST00000601038 RASD1Q9Y272 281 aa14.84□□□□□ -0.03
SCAF1-204ENST00000601038 DNHD1Q96M86 4753 aa14.84□□□□□ -0.03
SCAF1-204ENST00000601038 YLPM1P49750 1951 aaKnown RBP14.84□□□□□ -0.03
SCAF1-204ENST00000601038 TMEM229AB2RXF0 380 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 ZNF587BE7ETH6 402 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 KLF11O14901 512 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 ZNF500O60304 480 aaPredicted RBP14.83□□□□□ -0.04
SCAF1-204ENST00000601038 F12P00748 615 aaPredicted RBP14.83□□□□□ -0.04
SCAF1-204ENST00000601038 CSF3P09919 207 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 SELENOPP49908 381 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 VLDLRP98155 873 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 RGNQ15493 299 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 SWI5Q1ZZU3 235 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 MST1LQ2TV78 715 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 TBRG1Q3YBR2 411 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 ZNF311Q5JNZ3 666 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 C6orf52Q5T4I8 152 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 PRAMEF8Q5VWM4 474 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 PRAMEF7Q5VXH5 474 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 EPHX4Q8IUS5 362 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 MIER2Q8N344 545 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 OR9I1Q8NGQ6 314 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 OR1K1Q8NGR3 316 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 MFSD8Q8NHS3 518 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 C10orf105Q8TEF2 133 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 PROX1Q92786 737 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 VPS33AQ96AX1 596 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 ZNF317Q96PQ6 595 aaPredicted RBP14.83□□□□□ -0.04
SCAF1-204ENST00000601038 OR52B2Q96RD2 323 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 BCL2L10Q9HD36 194 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 PCDHB14Q9Y5E9 798 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 ARFGEF3Q5TH69 2177 aa14.83□□□□□ -0.04
SCAF1-204ENST00000601038 FTCDNL1E5RQL4 147 aa14.82□□□□□ -0.04
SCAF1-204ENST00000601038 AHSA1O95433 338 aa14.82□□□□□ -0.04
SCAF1-204ENST00000601038 LGI1O95970 557 aa14.82□□□□□ -0.04
SCAF1-204ENST00000601038 BMP2P12643 396 aa14.82□□□□□ -0.04
SCAF1-204ENST00000601038 MAGOHP61326 146 aaKnown RBP14.82□□□□□ -0.04
SCAF1-204ENST00000601038 LGALS3BPQ08380 585 aa14.82□□□□□ -0.04
SCAF1-204ENST00000601038 FADDQ13158 208 aa14.82□□□□□ -0.04
SCAF1-204ENST00000601038 NIPAL3Q6P499 406 aa14.82□□□□□ -0.04
SCAF1-204ENST00000601038 NANOS1Q8WY41 292 aaKnown RBP14.82□□□□□ -0.04
SCAF1-204ENST00000601038 GTF2H4Q92759 462 aa14.82□□□□□ -0.04
SCAF1-204ENST00000601038 BCL2L2Q92843 193 aaPredicted RBP14.82□□□□□ -0.04
SCAF1-204ENST00000601038 SLC38A2Q96QD8 506 aa14.82□□□□□ -0.04
SCAF1-204ENST00000601038 LINC00470Q9BZP3 86 aa14.82□□□□□ -0.04
SCAF1-204ENST00000601038 RAD21L1Q9H4I0 556 aa14.82□□□□□ -0.04
SCAF1-204ENST00000601038 A4GALTQ9NPC4 353 aa14.82□□□□□ -0.04
SCAF1-204ENST00000601038 ARPC4-TTLL3A0A0A6YYG9 625 aa14.81□□□□□ -0.04
SCAF1-204ENST00000601038 IGHV1-18A0A0C4DH31 117 aa14.81□□□□□ -0.04
SCAF1-204ENST00000601038 CLIC1O00299 241 aa14.81□□□□□ -0.04
SCAF1-204ENST00000601038 NUDT7P0C024 238 aa14.81□□□□□ -0.04
SCAF1-204ENST00000601038 UBE2NP61088 152 aaKnown RBP14.81□□□□□ -0.04
SCAF1-204ENST00000601038 EGR4Q05215 589 aa14.81□□□□□ -0.04
SCAF1-204ENST00000601038 LINGO2Q7L985 606 aa14.81□□□□□ -0.04
SCAF1-204ENST00000601038 BBS10Q8TAM1 723 aa14.81□□□□□ -0.04
SCAF1-204ENST00000601038 MAGEE2Q8TD90 523 aaPredicted RBP14.81□□□□□ -0.04
SCAF1-204ENST00000601038 TLCD1Q96CP7 247 aa14.81□□□□□ -0.04
SCAF1-204ENST00000601038 SLC25A36Q96CQ1 311 aa14.81□□□□□ -0.04
SCAF1-204ENST00000601038 FBXO17Q96EF6 278 aa14.81□□□□□ -0.04
SCAF1-204ENST00000601038 ALKBH3Q96Q83 286 aaPredicted RBP14.81□□□□□ -0.04
SCAF1-204ENST00000601038 KCNS3Q9BQ31 491 aa14.81□□□□□ -0.04
SCAF1-204ENST00000601038 KATNB1Q9BVA0 655 aa14.81□□□□□ -0.04
SCAF1-204ENST00000601038 PTDSS2Q9BVG9 487 aa14.81□□□□□ -0.04
SCAF1-204ENST00000601038 PAIP1Q9H074 479 aaKnown RBP14.81□□□□□ -0.04
SCAF1-204ENST00000601038 TMEM160Q9NX00 188 aa14.81□□□□□ -0.04
SCAF1-204ENST00000601038 CRNNQ9UBG3 495 aaPredicted RBP14.81□□□□□ -0.04
SCAF1-204ENST00000601038 UPK3AO75631 287 aa14.8□□□□□ -0.04
SCAF1-204ENST00000601038 CRYAAP02489 173 aa14.8□□□□□ -0.04
SCAF1-204ENST00000601038 PNMTP11086 282 aa14.8□□□□□ -0.04
SCAF1-204ENST00000601038 HOXB1P14653 301 aaPredicted RBP14.8□□□□□ -0.04
SCAF1-204ENST00000601038 ETS2P15036 469 aa14.8□□□□□ -0.04
SCAF1-204ENST00000601038 ZNF43P17038 809 aa14.8□□□□□ -0.04
SCAF1-204ENST00000601038 USF1P22415 310 aaPredicted RBP14.8□□□□□ -0.04
SCAF1-204ENST00000601038 SERPINF1P36955 418 aa14.8□□□□□ -0.04
SCAF1-204ENST00000601038 RPS5P46782 204 aaKnown RBP14.8□□□□□ -0.04
SCAF1-204ENST00000601038 HOXC5Q00444 222 aa14.8□□□□□ -0.04
SCAF1-204ENST00000601038 C3orf36Q3SXR2 165 aa14.8□□□□□ -0.04
SCAF1-204ENST00000601038 CYB5R2Q6BCY4 276 aa14.8□□□□□ -0.04
SCAF1-204ENST00000601038 ANKRD16Q6P6B7 361 aa14.8□□□□□ -0.04
SCAF1-204ENST00000601038 SLC2A7Q6PXP3 512 aa14.8□□□□□ -0.04
SCAF1-204ENST00000601038 EPGNQ6UW88 154 aa14.8□□□□□ -0.04
SCAF1-204ENST00000601038 C6orf89Q6UWU4 347 aa14.8□□□□□ -0.04
SCAF1-204ENST00000601038 KDM8Q8N371 416 aa14.8□□□□□ -0.04
SCAF1-204ENST00000601038 FAM169BQ8N8A8 192 aa14.8□□□□□ -0.04
SCAF1-204ENST00000601038 ANKK1Q8NFD2 765 aa14.8□□□□□ -0.04
SCAF1-204ENST00000601038 MAL2Q969L2 176 aa14.8□□□□□ -0.04
SCAF1-204ENST00000601038 C12orf10Q9HB07 376 aa14.8□□□□□ -0.04
SCAF1-204ENST00000601038 TMBIM4Q9HC24 238 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms