RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 OR5J2Q8NH18 312 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 OR51A7Q8NH64 312 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 FAM57AQ8TBR7 257 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 MAGEE2Q8TD90 523 aaPredicted RBP18.31■□□□□ 0.52
PNKP-215ENST00000600910 HIST1H2ACQ93077 130 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 SLC29A1Q99808 456 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 RBM4BQ9BQ04 359 aaKnown RBP18.31■□□□□ 0.52
PNKP-215ENST00000600910 RBM4Q9BWF3 364 aaKnown RBP18.31■□□□□ 0.52
PNKP-215ENST00000600910 MRPL39Q9NYK5 338 aaKnown RBP18.31■□□□□ 0.52
PNKP-215ENST00000600910 UNC119BA6NIH7 251 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 ZNF814B7Z6K7 855 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 EIF1BO60739 113 aaKnown RBP18.31■□□□□ 0.52
PNKP-215ENST00000600910 ENPP1P22413 925 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 H3F3AP84243 136 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 DAG1Q14118 895 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 PON3Q15166 354 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 ZNF239Q16600 458 aaKnown RBP18.31■□□□□ 0.52
PNKP-215ENST00000600910 KDM4DQ6B0I6 523 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 ZNF585AQ6P3V2 769 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 PAQR6Q6TCH4 344 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 KLHL17Q6TDP4 642 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 PLXDC2Q6UX71 529 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 NANOGNBQ7Z5D8 188 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 SCAIQ8N9R8 606 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 ST6GALNAC3Q8NDV1 305 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 ZPLD1Q8TCW7 415 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 NRG4Q8WWG1 115 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 ZHX1-C8orf76Q96EF9 292 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 UCN2Q96RP3 112 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 UCK2Q9BZX2 261 aa18.31■□□□□ 0.52
PNKP-215ENST00000600910 SHANK1Q9Y566 2161 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 GTF3C1Q12789 2109 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 CLCA1A8K7I4 914 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 AHRRA9YTQ3 701 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 BLOC1S5-TXNDC5H3BN57 136 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 SMAD9O15198 467 aaKnown RBP18.3■□□□□ 0.52
PNKP-215ENST00000600910 SLC19A2O60779 497 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 ALPLP05186 524 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 GSTM3P21266 225 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 ALDH3A2P51648 485 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 AGFG1P52594 562 aaKnown RBP18.3■□□□□ 0.52
PNKP-215ENST00000600910 IL1RL1Q01638 556 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 RBPJQ06330 500 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 PMS2P3Q13401 168 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 FHL1Q13642 323 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 CD300LDQ6UXZ3 194 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 H1FNTQ75WM6 255 aaPredicted RBP18.3■□□□□ 0.52
PNKP-215ENST00000600910 ROBO4Q8WZ75 1007 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 TNFRSF13CQ96RJ3 184 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 NAA11Q9BSU3 229 aaPredicted RBP18.3■□□□□ 0.52
PNKP-215ENST00000600910 CHST11Q9NPF2 352 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 PAPOLBQ9NRJ5 636 aaKnown RBP18.3■□□□□ 0.52
PNKP-215ENST00000600910 KRT84Q9NSB2 600 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 TMEFF2Q9UIK5 374 aaPredicted RBP18.3■□□□□ 0.52
PNKP-215ENST00000600910 MCTS1Q9ULC4 181 aaKnown RBP18.3■□□□□ 0.52
PNKP-215ENST00000600910 SIGLEC7Q9Y286 467 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 B3GALT5Q9Y2C3 310 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 ZNF835Q9Y2P0 537 aa18.3■□□□□ 0.52
PNKP-215ENST00000600910 KIAA1549Q9HCM3 1950 aa18.29■□□□□ 0.52
PNKP-215ENST00000600910 AQP7P3A6NL99 342 aa18.29■□□□□ 0.52
PNKP-215ENST00000600910 SYNGR4O95473 234 aa18.29■□□□□ 0.52
PNKP-215ENST00000600910 IGFBP5P24593 272 aa18.29■□□□□ 0.52
PNKP-215ENST00000600910 P2RY4P51582 365 aa18.29■□□□□ 0.52
PNKP-215ENST00000600910 RPS4XP62701 263 aaKnown RBP18.29■□□□□ 0.52
PNKP-215ENST00000600910 COX10Q12887 443 aa18.29■□□□□ 0.52
PNKP-215ENST00000600910 ZBED5Q49AG3 693 aa18.29■□□□□ 0.52
PNKP-215ENST00000600910 GALNT5Q7Z7M9 940 aa18.29■□□□□ 0.52
PNKP-215ENST00000600910 CCDC103Q8IW40 242 aa18.29■□□□□ 0.52
PNKP-215ENST00000600910 DNAJC9Q8WXX5 260 aa18.29■□□□□ 0.52
PNKP-215ENST00000600910 USE1Q9NZ43 259 aa18.29■□□□□ 0.52
PNKP-215ENST00000600910 POFUT2Q9Y2G5 429 aa18.29■□□□□ 0.52
PNKP-215ENST00000600910 HIF3AQ9Y2N7 669 aa18.29■□□□□ 0.52
PNKP-215ENST00000600910 COL6A6A6NMZ7 2263 aa18.29■□□□□ 0.52
PNKP-215ENST00000600910 PLPP3O14495 311 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 PRRG2O14669 202 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 RAMP1O60894 148 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 MITFO75030 526 aaPredicted RBP18.28■□□□□ 0.52
PNKP-215ENST00000600910 PTP4A3O75365 173 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 ADORA3P0DMS8 318 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 UQCRC1P31930 480 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 RASSF6Q6ZTQ3 369 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 ADGRE4PQ86SQ3 457 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 KIF18BQ86Y91 864 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 KDM8Q8N371 416 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 GALNT4Q8N4A0 578 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 ADPRHL1Q8NDY3 354 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 FNDC9Q8TBE3 224 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 FANK1Q8TC84 345 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 TRIB1Q96RU8 372 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 EGLN3Q9H6Z9 239 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 MCCC2Q9HCC0 563 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 TAS2R5Q9NYW4 299 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 REV1Q9UBZ9 1251 aa18.28■□□□□ 0.52
PNKP-215ENST00000600910 FIGNL2A6NMB9 653 aa18.27■□□□□ 0.52
PNKP-215ENST00000600910 KDM4EB2RXH2 506 aaPredicted RBP18.27■□□□□ 0.52
PNKP-215ENST00000600910 WDR1O75083 606 aa18.27■□□□□ 0.52
PNKP-215ENST00000600910 OR6A2O95222 327 aa18.27■□□□□ 0.52
PNKP-215ENST00000600910 SOX14O95416 240 aa18.27■□□□□ 0.52
PNKP-215ENST00000600910 TSPAN19P0C672 248 aa18.27■□□□□ 0.52
PNKP-215ENST00000600910 GABRA1P14867 456 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms