RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 MAMDC2Q7Z304 686 aaPredicted RBP11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 SVOPLQ8N434 492 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 RPRMLQ8N4K4 120 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 C10orf53Q8N6V4 93 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 TMEM99Q8N816 258 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 AQP11Q8NBQ7 271 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 OR5J2Q8NH18 312 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 MBD3L2Q8NHZ7 208 aaPredicted RBP11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 ZNF417Q8TAU3 575 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 GIPC3Q8TF64 312 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 ROBO4Q8WZ75 1007 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 WNT2BQ93097 391 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 ZHX1-C8orf76Q96EF9 292 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 TRIB1Q96RU8 372 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 ZNF587Q96SQ5 575 aaPredicted RBP11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 NAA11Q9BSU3 229 aaPredicted RBP11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 ASPNQ9BXN1 380 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 DGCR6LQ9BY27 220 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 GABARAPL1Q9H0R8 117 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 SEMA6AQ9H2E6 1030 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 CHST11Q9NPF2 352 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 KRCC1Q9NPI7 259 aaPredicted RBP11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 FANCFQ9NPI8 374 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 NANSQ9NR45 359 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 PDP1Q9P0J1 537 aaPredicted RBP11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 C6orf203Q9P0P8 240 aaPredicted RBP11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 ING1Q9UK53 422 aaPredicted RBP11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 OSGIN2Q9Y236 505 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 RRP15Q9Y3B9 282 aaKnown RBP11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 MAGED1Q9Y5V3 778 aaPredicted RBP11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 ZNF462Q96JM2 2506 aa11.3□□□□□ -0.6
CHMP2A-206ENST00000600118 IGHV3-15A0A0B4J1V0 119 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 LOC102725191A0A1B0GVB3 256 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 ZNF716A6NP11 495 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 E9PLN8 166 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 H0YHG0 523 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 PLPP3O14495 311 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 MGRN1O60291 552 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 PTP4A3O75365 173 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 GLI4P10075 376 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 GNLYP22749 145 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 UQCRC1P31930 480 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 UQCRFS1P47985 274 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 SLC9A3P48764 834 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 TSPAN31Q12999 210 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 PDK3Q15120 406 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 OTUD3Q5T2D3 398 aaPredicted RBP11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 FAHD1Q6P587 224 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 CD300LDQ6UXZ3 194 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 B3GNT6Q6ZMB0 384 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 C3P1Q6ZMU1 363 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 FCRLAQ7L513 359 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 ATCAYQ86WG3 371 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 HIPK1Q86Z02 1210 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 ZDHHC13Q8IUH4 622 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 EPHX4Q8IUS5 362 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 CCDC103Q8IW40 242 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 CDK20Q8IZL9 346 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 SLC43A2Q8N370 569 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 C9orf106Q8NAJ2 232 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 OR13C2Q8NGS9 318 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 GNPDA2Q8TDQ7 276 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 DMRTA2Q96SC8 542 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 FEVQ99581 238 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 VKORC1Q9BQB6 163 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 TTYH2Q9BSA4 534 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 DCLRE1BQ9H816 532 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 RNF122Q9H9V4 155 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 TAS2R5Q9NYW4 299 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 B3GAT1Q9P2W7 334 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 STX18Q9P2W9 335 aaKnown RBP11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 OAZ3Q9UMX2 235 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 MGAT4BQ9UQ53 548 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 SIGLEC7Q9Y286 467 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 HIF3AQ9Y2N7 669 aa11.29□□□□□ -0.6
CHMP2A-206ENST00000600118 IGKV3D-15A0A087WSY6 115 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 TRGV8A0A0C4DH27 118 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 A0A1W2PNV4 684 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 SAC3D1A6NKF1 404 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 G3V2T6 193 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 MS4A18H0YCH9 400 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 TOXO94900 526 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 VAMP5O95183 116 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 BAG2O95816 211 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 HPRP00739 348 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 ADAP00813 363 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 SAGP10523 405 aaPredicted RBP11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 FCGR2AP12318 317 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 ANXA8P13928 327 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 ZNF23P17027 643 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 ZNF26P17031 533 aaPredicted RBP11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 PRKACGP22612 351 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 GTF2E2P29084 291 aaKnown RBP11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 TIMP3P35625 211 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 ARHGDIAP52565 204 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 SLC16A1P53985 500 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 CASP6P55212 293 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 NUP107P57740 925 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 ZP4Q12836 540 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 PMS2P3Q13401 168 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms