RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 ADPRHL2Q9NX46 363 aa17.28■□□□□ 0.36
SHKBP1-221ENST00000599833 ELOVL5Q9NYP7 299 aa17.28■□□□□ 0.36
SHKBP1-221ENST00000599833 TAS2R1Q9NYW7 299 aa17.28■□□□□ 0.36
SHKBP1-221ENST00000599833 PRSS50Q9UI38 385 aa17.28■□□□□ 0.36
SHKBP1-221ENST00000599833 J3KTA2 159 aa17.27■□□□□ 0.36
SHKBP1-221ENST00000599833 TCN1P20061 433 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-221ENST00000599833 UGT2B10P36537 528 aa17.27■□□□□ 0.36
SHKBP1-221ENST00000599833 MNAT1P51948 309 aa17.27■□□□□ 0.36
SHKBP1-221ENST00000599833 LSM11P83369 360 aaKnown RBP eCLIP17.27■□□□□ 0.36
SHKBP1-221ENST00000599833 POU4F3Q15319 338 aa17.27■□□□□ 0.36
SHKBP1-221ENST00000599833 SPATS1Q496A3 300 aa17.27■□□□□ 0.36
SHKBP1-221ENST00000599833 DEF8Q6ZN54 512 aa17.27■□□□□ 0.36
SHKBP1-221ENST00000599833 EPHX4Q8IUS5 362 aa17.27■□□□□ 0.36
SHKBP1-221ENST00000599833 OR9K2Q8NGE7 335 aa17.27■□□□□ 0.36
SHKBP1-221ENST00000599833 C7orf34Q96L11 122 aa17.27■□□□□ 0.36
SHKBP1-221ENST00000599833 ZNF385AQ96PM9 386 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-221ENST00000599833 NAA11Q9BSU3 229 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-221ENST00000599833 SF3B5Q9BWJ5 86 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-221ENST00000599833 TAPBPLQ9BX59 468 aa17.27■□□□□ 0.36
SHKBP1-221ENST00000599833 NDE1Q9NXR1 346 aa17.27■□□□□ 0.36
SHKBP1-221ENST00000599833 KCNN3Q9UGI6 736 aa17.27■□□□□ 0.36
SHKBP1-221ENST00000599833 RIMS3Q9UJD0 308 aa17.27■□□□□ 0.36
SHKBP1-221ENST00000599833 M0R082 166 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 ARPC2O15144 300 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 GSTA4O15217 222 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 OR2T1O43869 369 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 ZNF682O95780 498 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 GRPRP30550 384 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 UGT2B15P54855 530 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 SLC46A3Q7Z3Q1 461 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 GALNT5Q7Z7M9 940 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 KDM8Q8N371 416 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 ADPRHL1Q8NDY3 354 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 ZNF417Q8TAU3 575 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 GEMIN6Q8WXD5 167 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 FAM162AQ96A26 154 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 TMEM45BQ96B21 275 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 SLC25A36Q96CQ1 311 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 SLC7A6OSQ96CW6 309 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 MPP4Q96JB8 637 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 PRRC1Q96M27 445 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 ZNF587Q96SQ5 575 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 C1orf21Q9H246 121 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 TESMINQ9Y4I5 508 aa17.26■□□□□ 0.35
SHKBP1-221ENST00000599833 MS4A18H0YCH9 400 aa17.25■□□□□ 0.35
SHKBP1-221ENST00000599833 PDLIM1O00151 329 aa17.25■□□□□ 0.35
SHKBP1-221ENST00000599833 HPRP00739 348 aa17.25■□□□□ 0.35
SHKBP1-221ENST00000599833 POU2F1P14859 743 aa17.25■□□□□ 0.35
SHKBP1-221ENST00000599833 PSMB1P20618 241 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-221ENST00000599833 KIR2DL3P43628 341 aa17.25■□□□□ 0.35
SHKBP1-221ENST00000599833 KRTAP10-9P60411 292 aa17.25■□□□□ 0.35
SHKBP1-221ENST00000599833 ZNF74Q16587 644 aa17.25■□□□□ 0.35
SHKBP1-221ENST00000599833 EXOC3L2Q2M3D2 409 aa17.25■□□□□ 0.35
SHKBP1-221ENST00000599833 MS4A18Q3C1V0 323 aa17.25■□□□□ 0.35
SHKBP1-221ENST00000599833 IFI44LQ53G44 452 aa17.25■□□□□ 0.35
SHKBP1-221ENST00000599833 BEND4Q6ZU67 534 aa17.25■□□□□ 0.35
SHKBP1-221ENST00000599833 CREB3L2Q70SY1 520 aa17.25■□□□□ 0.35
SHKBP1-221ENST00000599833 KIF18BQ86Y91 864 aa17.25■□□□□ 0.35
SHKBP1-221ENST00000599833 WDFY1Q8IWB7 410 aa17.25■□□□□ 0.35
SHKBP1-221ENST00000599833 TMEM255BQ8WV15 326 aa17.25■□□□□ 0.35
SHKBP1-221ENST00000599833 LZICQ8WZA0 190 aa17.25■□□□□ 0.35
SHKBP1-221ENST00000599833 SLC19A3Q9BZV2 496 aa17.25■□□□□ 0.35
SHKBP1-221ENST00000599833 LOC102725191A0A1B0GVB3 256 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 SIAH2O43255 324 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 THBDP07204 575 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 THRBP10828 461 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 COX5AP20674 150 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 ATP6V1B2P21281 511 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 CBLP22681 906 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 PEX19P40855 299 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 FOXG1P55316 489 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 TAS2R41P59536 307 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 Q6ZT83 130 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 OFCC1Q8IZS5 231 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 PFN4Q8NHR9 129 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 FAM222BQ8WU58 562 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 LRRC46Q96FV0 321 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 WFIKKN1Q96NZ8 548 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 FANCFQ9NPI8 374 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 MRPL39Q9NYK5 338 aaKnown RBP17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 SELENONQ9NZV5 590 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 EMC3Q9P0I2 261 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 MAGEL2Q9UJ55 1249 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 RASD1Q9Y272 281 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 B3GALT5Q9Y2C3 310 aa17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 NOSIPQ9Y314 301 aaKnown RBP17.24■□□□□ 0.35
SHKBP1-221ENST00000599833 OTOGQ6ZRI0 2925 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 TUBAL3A6NHL2 446 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 C16orf97H3BN30 126 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 GPR171O14626 319 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 TRAF3IP2O43734 574 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 VAMP5O95183 116 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 IGF2P01344 180 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 IFNW1P05000 195 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 TSPAN19P0C672 248 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 RBM34P42696 430 aaKnown RBP17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 YAP1P46937 504 aaKnown RBP17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 MXRA7P84157 204 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 VLDLRP98155 873 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 MS4A2Q01362 244 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms