RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 UQCRC1P31930 480 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 ACVR1BP36896 505 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 RANBP1P43487 201 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 LCN6P62502 163 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 RPL18Q07020 188 aaKnown RBP13.15□□□□□ -0.3
VRK3-217ENST00000599538 ALG10Q5BKT4 473 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 LEG1Q6P5S2 330 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 PAPD4Q6PIY7 484 aaKnown RBP13.15□□□□□ -0.3
VRK3-217ENST00000599538 OVCH1Q7RTY7 1134 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 PPP1R3BQ86XI6 285 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 POC5Q8NA72 575 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 OR13C5Q8NGS8 318 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 OR6K6Q8NGW6 343 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 HTRA1Q92743 480 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 CCNL2Q96S94 520 aaPredicted RBP13.15□□□□□ -0.3
VRK3-217ENST00000599538 SPSB2Q99619 263 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 TRIM36Q9NQ86 728 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 RPRD1BQ9NQG5 326 aaKnown RBP13.15□□□□□ -0.3
VRK3-217ENST00000599538 INPP5EQ9NRR6 644 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 HRH3Q9Y5N1 445 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 NPFFR2Q9Y5X5 522 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 KIF26BQ2KJY2 2108 aa13.14□□□□□ -0.31
VRK3-217ENST00000599538 BOLA2-SMG1P6H3BVE0 249 aa13.14□□□□□ -0.31
VRK3-217ENST00000599538 CDC40O60508 579 aaKnown RBP eCLIP13.14□□□□□ -0.31
VRK3-217ENST00000599538 ZNF28P17035 718 aa13.14□□□□□ -0.31
VRK3-217ENST00000599538 GRPRP30550 384 aa13.14□□□□□ -0.31
VRK3-217ENST00000599538 SLC6A8P48029 635 aa13.14□□□□□ -0.31
VRK3-217ENST00000599538 DIO1P49895 249 aa13.14□□□□□ -0.31
VRK3-217ENST00000599538 EMP2P54851 167 aa13.14□□□□□ -0.31
VRK3-217ENST00000599538 SIGLEC14Q08ET2 396 aa13.14□□□□□ -0.31
VRK3-217ENST00000599538 TRIM61Q5EBN2 209 aa13.14□□□□□ -0.31
VRK3-217ENST00000599538 LINC01590Q5TEZ4 76 aa13.14□□□□□ -0.31
VRK3-217ENST00000599538 PEAR1Q5VY43 1037 aaPredicted RBP13.14□□□□□ -0.31
VRK3-217ENST00000599538 FAM199XQ6PEV8 388 aaPredicted RBP13.14□□□□□ -0.31
VRK3-217ENST00000599538 LSM14AQ8ND56 463 aaKnown RBP13.14□□□□□ -0.31
VRK3-217ENST00000599538 NAT6Q93015 286 aa13.14□□□□□ -0.31
VRK3-217ENST00000599538 PMEPA1Q969W9 287 aa13.14□□□□□ -0.31
VRK3-217ENST00000599538 PGLYRP3Q96LB9 341 aa13.14□□□□□ -0.31
VRK3-217ENST00000599538 RNF32Q9H0A6 362 aa13.14□□□□□ -0.31
VRK3-217ENST00000599538 GALNT9Q9HCQ5 603 aa13.14□□□□□ -0.31
VRK3-217ENST00000599538 NCOR1O75376 2440 aa13.14□□□□□ -0.31
VRK3-217ENST00000599538 EXPH5Q8NEV8 1989 aa13.14□□□□□ -0.31
VRK3-217ENST00000599538 VSTM2BA6NLU5 285 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 PRR32B1ATL7 298 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 SSX4O60224 188 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 EIF4E2O60573 245 aaKnown RBP13.13□□□□□ -0.31
VRK3-217ENST00000599538 IGF2P01344 180 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 CD14P08571 375 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 LCN1P31025 176 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 DAB2P98082 770 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 CD300CQ08708 224 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 GGTLC2Q14390 218 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 PON3Q15166 354 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 QPRTQ15274 297 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 BAK1Q16611 211 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 BICRALQ6AI39 1079 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 SLC35F2Q8IXU6 374 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 ZNF511Q8NB15 262 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 CEP76Q8TAP6 659 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 WDFY2Q96P53 400 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 CNN2Q99439 309 aaKnown RBP13.13□□□□□ -0.31
VRK3-217ENST00000599538 GTPBP2Q9BX10 602 aaKnown RBP13.13□□□□□ -0.31
VRK3-217ENST00000599538 UGT2A1Q9Y4X1 527 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 GPR179Q6PRD1 2367 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 TRBV11-1A0A0K0K1C0 115 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 OR6C70A6NIJ9 312 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 PSMD9O00233 223 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 PLPP2O43688 288 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 RGS9O75916 674 aaPredicted RBP13.13□□□□□ -0.31
VRK3-217ENST00000599538 BGLAPP02818 100 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 CXCR1P25024 350 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 SHC1P29353 583 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 ZNF554Q86TJ5 538 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 GPR119Q8TDV5 335 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 PELI1Q96FA3 418 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 TSPAN32Q96QS1 320 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 NEURL2Q9BR09 285 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 PTDSS2Q9BVG9 487 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 OR11A1Q9GZK7 315 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 COMMD3Q9UBI1 195 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 ST6GALNAC2Q9UJ37 374 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 ZNF229Q9UJW7 825 aa13.13□□□□□ -0.31
VRK3-217ENST00000599538 BDP1A6H8Y1 2624 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 TMEM72A0PK05 275 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 ISPDA4D126 451 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 MEN1O00255 615 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 HNRNPCP07910 306 aaKnown RBP eCLIP13.12□□□□□ -0.31
VRK3-217ENST00000599538 PGCP20142 388 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 P2RX1P51575 399 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 POU4F2Q12837 409 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 GPR50Q13585 617 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 COL28A1Q2UY09 1125 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 MESTQ5EB52 335 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 NANOGNBQ7Z5D8 188 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 ADGRG3Q86Y34 549 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 CADM3Q8N126 398 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 TMEM105Q8N8V8 129 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 EXD3Q8N9H8 876 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 C7orf57Q8NEG2 295 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 METTL21AQ8WXB1 218 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms