RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 CDK5Q00535 292 aa13.9□□□□□ -0.18
UPF1-206ENST00000598471 IL5RAQ01344 420 aa13.9□□□□□ -0.18
UPF1-206ENST00000598471 PMP22Q01453 160 aa13.9□□□□□ -0.18
UPF1-206ENST00000598471 PGGHGQ32M88 737 aa13.9□□□□□ -0.18
UPF1-206ENST00000598471 ALG10Q5BKT4 473 aa13.9□□□□□ -0.18
UPF1-206ENST00000598471 Q6ZPB1 254 aaPredicted RBP13.9□□□□□ -0.18
UPF1-206ENST00000598471 TMPPEQ6ZT21 453 aa13.9□□□□□ -0.18
UPF1-206ENST00000598471 ESPNLQ6ZVH7 1005 aa13.9□□□□□ -0.18
UPF1-206ENST00000598471 THAP5Q7Z6K1 395 aa13.9□□□□□ -0.18
UPF1-206ENST00000598471 ADPRHL1Q8NDY3 354 aa13.9□□□□□ -0.18
UPF1-206ENST00000598471 OR8D4Q8NGM9 314 aa13.9□□□□□ -0.18
UPF1-206ENST00000598471 DNAJA3Q96EY1 480 aa13.9□□□□□ -0.18
UPF1-206ENST00000598471 PLEKHA8Q96JA3 519 aa13.9□□□□□ -0.18
UPF1-206ENST00000598471 MFRPQ9BY79 579 aa13.9□□□□□ -0.18
UPF1-206ENST00000598471 SLC6A15Q9H2J7 730 aa13.9□□□□□ -0.18
UPF1-206ENST00000598471 CHST11Q9NPF2 352 aa13.9□□□□□ -0.18
UPF1-206ENST00000598471 SLC6A5Q9Y345 797 aa13.9□□□□□ -0.18
UPF1-206ENST00000598471 TRGV5A0A0B4J1U4 118 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 A0A1W2PNR3 127 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 M0R082 166 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 DNPH1O43598 174 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 EIF1BO60739 113 aaKnown RBP13.89□□□□□ -0.19
UPF1-206ENST00000598471 FZD7O75084 574 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 CRYABP02511 175 aaKnown RBP13.89□□□□□ -0.19
UPF1-206ENST00000598471 OPN1LWP04000 364 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 CELA3AP09093 270 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 ADORA3P0DMS8 318 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 IMPDH2P12268 514 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 SHC1P29353 583 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 UQCRC1P31930 480 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 GRK5P34947 590 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 AQP2P41181 271 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 DIO1P49895 249 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 PDK3Q15120 406 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 TMEM236Q5W0B7 351 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 C12orf73Q69YU5 71 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 ARHGAP11AQ6P4F7 1023 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 DPY19L2P2Q6ZN68 376 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 H1FNTQ75WM6 255 aaPredicted RBP13.89□□□□□ -0.19
UPF1-206ENST00000598471 LSRQ86X29 649 aaPredicted RBP13.89□□□□□ -0.19
UPF1-206ENST00000598471 MEIOBQ8N635 442 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 IQCF1Q8N6M8 205 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 NEIL3Q8TAT5 605 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 ZNF417Q8TAU3 575 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 ABTB1Q969K4 478 aaPredicted RBP13.89□□□□□ -0.19
UPF1-206ENST00000598471 RELTQ969Z4 430 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 GPX7Q96SL4 187 aaPredicted RBP13.89□□□□□ -0.19
UPF1-206ENST00000598471 ZNF587Q96SQ5 575 aaPredicted RBP13.89□□□□□ -0.19
UPF1-206ENST00000598471 NAA11Q9BSU3 229 aaPredicted RBP13.89□□□□□ -0.19
UPF1-206ENST00000598471 DEFB127Q9H1M4 99 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 TIGARQ9NQ88 270 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 B3GALT5Q9Y2C3 310 aa13.89□□□□□ -0.19
UPF1-206ENST00000598471 K7EM74 188 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 PLPP3O14495 311 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 EIF1AYO14602 144 aaKnown RBP13.88□□□□□ -0.19
UPF1-206ENST00000598471 SEC14L5O43304 696 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 RNF13O43567 381 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 IDH3BO43837 385 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 IFNGP01579 166 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 TSPAN19P0C672 248 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 FAM87AP0C7U9 286 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 NOS3P29474 1203 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 FXYD6P3P58550 94 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 RPS3AP61247 264 aaKnown RBP13.88□□□□□ -0.19
UPF1-206ENST00000598471 RPL18Q07020 188 aaKnown RBP13.88□□□□□ -0.19
UPF1-206ENST00000598471 PUDPQ08623 228 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 FHL1Q13642 323 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 BCL2A1Q16548 175 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 RNFT1Q5M7Z0 435 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 HBMQ6B0K9 141 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 THSD4Q6ZMP0 1018 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 PTCHD4Q6ZW05 846 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 UBQLNLQ8IYU4 475 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 LNX2Q8N448 690 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 OR2V1Q8NHB1 315 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 MOSPD2Q8NHP6 518 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 TRUB1Q8WWH5 349 aaKnown RBP13.88□□□□□ -0.19
UPF1-206ENST00000598471 PNPLA2Q96AD5 504 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 INIPQ9NRY2 104 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 PNPLA3Q9NST1 481 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 TVP23BQ9NYZ1 205 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 IL20RAQ9UHF4 553 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 LHX6Q9UPM6 363 aa13.88□□□□□ -0.19
UPF1-206ENST00000598471 A0A0J9YW62 118 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 MCIDASD6RGH6 385 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 BHLHE40O14503 412 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 TNFSF11O14788 317 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 PPP1R3DO95685 299 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 IGHG3P01860 377 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 CD14P08571 375 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 APEHP13798 732 aaKnown RBP13.87□□□□□ -0.19
UPF1-206ENST00000598471 AHCYP23526 432 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 PCYT1AP49585 367 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 STARP49675 285 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 LHX2P50458 406 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 CTXN1P60606 82 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 MYBPC1Q00872 1141 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 ZP4Q12836 540 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 SNAPC1Q16533 368 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 LINC00303Q3SY05 128 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms