RNA–Protein interactions for RNA: ENST00000596386.1

PSMC4-204, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-204ENST00000596386 ATG16L1Q676U5 607 aa13.7□□□□□ -0.22
PSMC4-204ENST00000596386 CREB3L2Q70SY1 520 aa13.7□□□□□ -0.22
PSMC4-204ENST00000596386 MAVSQ7Z434 540 aa13.7□□□□□ -0.22
PSMC4-204ENST00000596386 SERPINA11Q86U17 422 aa13.7□□□□□ -0.22
PSMC4-204ENST00000596386 OR1K1Q8NGR3 316 aa13.7□□□□□ -0.22
PSMC4-204ENST00000596386 MGARPQ8TDB4 240 aa13.7□□□□□ -0.22
PSMC4-204ENST00000596386 VPS33AQ96AX1 596 aa13.7□□□□□ -0.22
PSMC4-204ENST00000596386 C3orf49Q96BT1 292 aa13.7□□□□□ -0.22
PSMC4-204ENST00000596386 ITCHQ96J02 903 aa13.7□□□□□ -0.22
PSMC4-204ENST00000596386 ALKBH3Q96Q83 286 aaPredicted RBP13.7□□□□□ -0.22
PSMC4-204ENST00000596386 SPATA9Q9BWV2 254 aa13.7□□□□□ -0.22
PSMC4-204ENST00000596386 ARMC7Q9H6L4 198 aa13.7□□□□□ -0.22
PSMC4-204ENST00000596386 CACYBPQ9HB71 228 aaKnown RBP13.7□□□□□ -0.22
PSMC4-204ENST00000596386 TMEM45AQ9NWC5 275 aa13.7□□□□□ -0.22
PSMC4-204ENST00000596386 ZNF232Q9UNY5 417 aa13.7□□□□□ -0.22
PSMC4-204ENST00000596386 MOKQ9UQ07 419 aa13.7□□□□□ -0.22
PSMC4-204ENST00000596386 A0A0G2JPF8 293 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 TMEM247A6NEH6 219 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 OR6C65A6NJZ3 312 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 HNRNPCL2B2RXH8 293 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 HNRNPCL3B7ZW38 293 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 ZNF587BE7ETH6 402 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 KLF11O14901 512 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 HNRNPCL1O60812 293 aaKnown RBP13.69□□□□□ -0.22
PSMC4-204ENST00000596386 LGI1O95970 557 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 HNRNPCL4P0DMR1 293 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 SLC18A1P54219 525 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 SWI5Q1ZZU3 235 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 MST1LQ2TV78 715 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 TBRG1Q3YBR2 411 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 PRAMEF8Q5VWM4 474 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 PRAMEF7Q5VXH5 474 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 EPHX4Q8IUS5 362 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 OR9I1Q8NGQ6 314 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 STK35Q8TDR2 534 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 NANOS1Q8WY41 292 aaKnown RBP13.69□□□□□ -0.22
PSMC4-204ENST00000596386 PROX1Q92786 737 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 SLC38A2Q96QD8 506 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 REPIN1Q9BWE0 567 aaKnown RBP13.69□□□□□ -0.22
PSMC4-204ENST00000596386 CDC42EP3Q9UKI2 254 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 RASD1Q9Y272 281 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 IFT52Q9Y366 437 aa13.69□□□□□ -0.22
PSMC4-204ENST00000596386 SVEP1Q4LDE5 3571 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 IGHV1-18A0A0C4DH31 117 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 RNF212BA8MTL3 300 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 UBDO15205 165 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 LY6HO94772 140 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 AHSA1O95433 338 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 F12P00748 615 aaPredicted RBP13.68□□□□□ -0.22
PSMC4-204ENST00000596386 FAM157CP0CG43 387 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 PAX7P23759 505 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 POLR2JP52435 117 aaKnown RBP13.68□□□□□ -0.22
PSMC4-204ENST00000596386 LGALS3BPQ08380 585 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 C6orf10Q5SRN2 563 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 NIPAL3Q6P499 406 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 MFSD8Q8NHS3 518 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 SLC35B4Q969S0 331 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 FBXO17Q96EF6 278 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 ZNF317Q96PQ6 595 aaPredicted RBP13.68□□□□□ -0.22
PSMC4-204ENST00000596386 OR52B2Q96RD2 323 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 KATNB1Q9BVA0 655 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 PTDSS2Q9BVG9 487 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 TMEM160Q9NX00 188 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 FKBP7Q9Y680 259 aa13.68□□□□□ -0.22
PSMC4-204ENST00000596386 MALRD1Q5VYJ5 2156 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 ARPC4-TTLL3A0A0A6YYG9 625 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 FTCDNL1E5RQL4 147 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 NUDT7P0C024 238 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 IGHV4-31P0DP07 118 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 PNMTP11086 282 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 USF1P22415 310 aaPredicted RBP13.67□□□□□ -0.22
PSMC4-204ENST00000596386 UBE2NP61088 152 aaKnown RBP13.67□□□□□ -0.22
PSMC4-204ENST00000596386 SNRPD2P62316 118 aaKnown RBP13.67□□□□□ -0.22
PSMC4-204ENST00000596386 FADDQ13158 208 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 RGNQ15493 299 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 ZNF311Q5JNZ3 666 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 LINGO2Q7L985 606 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 MIER2Q8N344 545 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 MAGEE2Q8TD90 523 aaPredicted RBP13.67□□□□□ -0.22
PSMC4-204ENST00000596386 GTF2H4Q92759 462 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 BCL2L2Q92843 193 aaPredicted RBP13.67□□□□□ -0.22
PSMC4-204ENST00000596386 SORCS2Q96PQ0 1159 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 KCNK17Q96T54 332 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 KCNS3Q9BQ31 491 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 LINC00470Q9BZP3 86 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 MOV10Q9HCE1 1003 aaKnown RBP13.67□□□□□ -0.22
PSMC4-204ENST00000596386 BCL2L10Q9HD36 194 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 A4GALTQ9NPC4 353 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 CA10Q9NS85 328 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 NKIRAS1Q9NYS0 192 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 CRNNQ9UBG3 495 aaPredicted RBP13.67□□□□□ -0.22
PSMC4-204ENST00000596386 RCE1Q9Y256 329 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 PCDHB14Q9Y5E9 798 aa13.67□□□□□ -0.22
PSMC4-204ENST00000596386 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.66□□□□□ -0.222e-6■■■□□ 16.3
PSMC4-204ENST00000596386 VWC2LB2RUY7 222 aa13.66□□□□□ -0.22
PSMC4-204ENST00000596386 FZD7O75084 574 aa13.66□□□□□ -0.22
PSMC4-204ENST00000596386 UPK3AO75631 287 aa13.66□□□□□ -0.22
PSMC4-204ENST00000596386 CRYAAP02489 173 aa13.66□□□□□ -0.22
PSMC4-204ENST00000596386 BMP2P12643 396 aa13.66□□□□□ -0.22
PSMC4-204ENST00000596386 ZNF16P17020 682 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms