RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 RLIMQ9NVW2 624 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 TLDC2A0PJX2 215 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 ZNF503-AS2A6NEH8 195 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 OR6C65A6NJZ3 312 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 TMEM229AB2RXF0 380 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 FRS3O43559 492 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 ITM2AO43736 263 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 NPIPB7O75200 414 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 SNUPNO95149 360 aaKnown RBP8.62□□□□□ -1.03
LIG1-209ENST00000596104 VAMP5O95183 116 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 BPGMP07738 259 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 HOXB1P14653 301 aaPredicted RBP8.62□□□□□ -1.03
LIG1-209ENST00000596104 CBR1P16152 277 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 NPR2P20594 1047 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 CHI3L1P36222 383 aaPredicted RBP8.62□□□□□ -1.03
LIG1-209ENST00000596104 ACAA2P42765 397 aaKnown RBP8.62□□□□□ -1.03
LIG1-209ENST00000596104 ETV4P43268 484 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 SH3BGRP55822 239 aaPredicted RBP8.62□□□□□ -1.03
LIG1-209ENST00000596104 BNIP2Q12982 314 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 MAPK11Q15759 364 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 PDCD2Q16342 344 aaPredicted RBP8.62□□□□□ -1.03
LIG1-209ENST00000596104 TMEM225Q6GV28 225 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 NIPAL3Q6P499 406 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 DEF8Q6ZN54 512 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 SPATA21Q7Z572 469 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 CDK20Q8IZL9 346 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 VPS37AQ8NEZ2 397 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 UBASH3BQ8TF42 649 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 ZFAND2BQ8WV99 257 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 PPP1R36Q96LQ0 422 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 CCDC115Q96NT0 180 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 LINC00470Q9BZP3 86 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 ADPRHL2Q9NX46 363 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 BTNL2Q9UIR0 455 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 PRDM4Q9UKN5 801 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 PCDHB14Q9Y5E9 798 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 TENM1Q9UKZ4 2725 aa8.62□□□□□ -1.03
LIG1-209ENST00000596104 DSPPQ9NZW4 1301 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 A0A0A6YYJ9 748 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 IGHV2OR16-5A0A0B4J2B6 119 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 CDHR4A6H8M9 788 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 CCDC154A6NI56 674 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 A8MVM7 634 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 E9PBE3 544 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 SLCO1B7G3V0H7 640 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 LYNX1G3V0Z9 82 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 RPL36A-HNRNPH2H7BZ11 118 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 SPRY1O43609 319 aaPredicted RBP8.61□□□□□ -1.03
LIG1-209ENST00000596104 ZNF432O94892 652 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 DBIP07108 87 aaKnown RBP8.61□□□□□ -1.03
LIG1-209ENST00000596104 ERCC1P07992 297 aaPredicted RBP8.61□□□□□ -1.03
LIG1-209ENST00000596104 GKN3PP0CG01 181 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 LYNX1P0DP58 116 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 UQCRBP14927 111 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 IFNGR1P15260 489 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 CREB1P16220 341 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 IL7RP16871 459 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 CXCR1P25024 350 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 TXNL4AP83876 142 aaKnown RBP8.61□□□□□ -1.03
LIG1-209ENST00000596104 ARF1P84077 181 aaKnown RBP8.61□□□□□ -1.03
LIG1-209ENST00000596104 ROR2Q01974 943 aaKnown RBP8.61□□□□□ -1.03
LIG1-209ENST00000596104 POU3F1Q03052 451 aaPredicted RBP8.61□□□□□ -1.03
LIG1-209ENST00000596104 GNA13Q14344 377 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 ADRM1Q16186 407 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 MSMPQ1L6U9 139 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 DPY19L1Q2PZI1 675 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 FAM174BQ3ZCQ3 159 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 COX20Q5RI15 118 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 C1orf140Q5VVS0 124 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 PRAMEF8Q5VWM4 474 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 PRAMEF7Q5VXH5 474 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 RINLQ6ZS11 566 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 VRK2Q86Y07 508 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 ZNF440Q8IYI8 595 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 RIBC1Q8N443 379 aaPredicted RBP8.61□□□□□ -1.03
LIG1-209ENST00000596104 ZNF781Q8N8C0 355 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 ANKK1Q8NFD2 765 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 CKAP2Q8WWK9 683 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 TEX37Q96LM6 180 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 ANKRD27Q96NW4 1050 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 TAPBPLQ9BX59 468 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 LGALS13Q9UHV8 139 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 METRNQ9UJH8 293 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 RCE1Q9Y256 329 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 RASD1Q9Y272 281 aa8.61□□□□□ -1.03
LIG1-209ENST00000596104 MGAM2Q2M2H8 2515 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 HEATR1Q9H583 2144 aaKnown RBP8.6□□□□□ -1.03
LIG1-209ENST00000596104 SH3PXD2BA1X283 911 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 VSTM5A8MXK1 200 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 B4DSR2 109 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 FTCDNL1E5RQL4 147 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 TYROBPO43914 113 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 FZD7O75084 574 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 ADRA2AP08913 450 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 TFPTP0C1Z6 253 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 NR2F1P10589 423 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 PNMTP11086 282 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 PRG2P13727 222 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 EGR1P18146 543 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 PCMT1P22061 227 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms