RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 IL5RAQ01344 420 aa17.67■□□□□ 0.42
LSM4-203ENST00000593829 QPRTQ15274 297 aa17.67■□□□□ 0.42
LSM4-203ENST00000593829 NPTX1Q15818 432 aa17.67■□□□□ 0.42
LSM4-203ENST00000593829 ZNF836Q6ZNA1 936 aa17.67■□□□□ 0.42
LSM4-203ENST00000593829 RPRMLQ8N4K4 120 aa17.67■□□□□ 0.42
LSM4-203ENST00000593829 RHOXF1Q8NHV9 184 aa17.67■□□□□ 0.42
LSM4-203ENST00000593829 NDNFQ8TB73 568 aa17.67■□□□□ 0.42
LSM4-203ENST00000593829 ZPLD1Q8TCW7 415 aa17.67■□□□□ 0.42
LSM4-203ENST00000593829 NPAS1Q99742 590 aa17.67■□□□□ 0.42
LSM4-203ENST00000593829 CCDC90BQ9GZT6 254 aa17.67■□□□□ 0.42
LSM4-203ENST00000593829 DNAJB12Q9NXW2 375 aaKnown RBP17.67■□□□□ 0.42
LSM4-203ENST00000593829 ANGPT4Q9Y264 503 aa17.67■□□□□ 0.42
LSM4-203ENST00000593829 UGT2A1Q9Y4X1 527 aa17.67■□□□□ 0.42
LSM4-203ENST00000593829 NR4A1P22736 598 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 IGFBP5P24593 272 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 UGT2B10P36537 528 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 SLC6A8P48029 635 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 PLAURQ03405 335 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 FOXF1Q12946 379 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 ACSF3Q4G176 576 aaPredicted RBP17.66■□□□□ 0.42
LSM4-203ENST00000593829 ZNF311Q5JNZ3 666 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 ANKRD34AQ69YU3 496 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 RPTNQ6XPR3 784 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 POC1BQ8TC44 478 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 IPCEF1Q8WWN9 437 aaPredicted RBP17.66■□□□□ 0.42
LSM4-203ENST00000593829 MRGPRX4Q96LA9 322 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 ZNF607Q96SK3 696 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 TTYH2Q9BSA4 534 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 SPATA5L1Q9BVQ7 753 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 SPATA9Q9BWV2 254 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 SLIRPQ9GZT3 109 aaKnown RBP17.66■□□□□ 0.42
LSM4-203ENST00000593829 ERVK-18Q9QC07 812 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 OSGIN1Q9UJX0 560 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 A3GALT2U3KPV4 340 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 USP9XQ93008 2570 aaPredicted RBP17.66■□□□□ 0.42
LSM4-203ENST00000593829 CDHR4A6H8M9 788 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 RNF224P0DH78 156 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 PRKCAP17252 672 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 SMSP52788 366 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 EEF1A1P68104 462 aaKnown RBP17.66■□□□□ 0.42
LSM4-203ENST00000593829 ADORA2A-AS1P86434 159 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 CD300CQ08708 224 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 PMPCAQ10713 525 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 SLC30A8Q8IWU4 369 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 ZNF440Q8IYI8 595 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 UBQLNLQ8IYU4 475 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 MEIOBQ8N635 442 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 CNIH3Q8TBE1 160 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 TMEM234Q8WY98 164 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 ST8SIA1Q92185 356 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 SIGLEC11Q96RL6 698 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 APOL4Q9BPW4 351 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 RLIMQ9NVW2 624 aa17.66■□□□□ 0.42
LSM4-203ENST00000593829 MYO7BQ6PIF6 2116 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 E9PQ18 207 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 XPNPEP2O43895 674 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 EPPINO95925 133 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 GSTT2P0CG29 244 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 GSTT2BP0CG30 244 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 GLI4P10075 376 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 CSNK2BP67870 215 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 TUBA1BP68363 451 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 SLC25A53Q5H9E4 307 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 KDM4DQ6B0I6 523 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 TUBA1AQ71U36 451 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 ARMC8Q8IUR7 673 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 GRAMD2AQ8IUY3 354 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 ZZZ3Q8IYH5 903 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 CHAC2Q8WUX2 184 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 SMPDL3BQ92485 455 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 RND1Q92730 232 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 ZNF524Q96C55 264 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 MED12Q93074 2177 aa17.65■□□□□ 0.42
LSM4-203ENST00000593829 ETV2O00321 342 aaPredicted RBP17.64■□□□□ 0.42
LSM4-203ENST00000593829 NTN1O95631 604 aa17.64■□□□□ 0.42
LSM4-203ENST00000593829 SERPINA1P01009 418 aa17.64■□□□□ 0.42
LSM4-203ENST00000593829 AQP1P29972 269 aa17.64■□□□□ 0.42
LSM4-203ENST00000593829 RAC1P63000 192 aa17.64■□□□□ 0.42
LSM4-203ENST00000593829 MRGPRGQ86SM5 289 aa17.64■□□□□ 0.42
LSM4-203ENST00000593829 CLIP4Q8N3C7 705 aa17.64■□□□□ 0.42
LSM4-203ENST00000593829 ZNF563Q8TA94 476 aa17.64■□□□□ 0.42
LSM4-203ENST00000593829 HPS1Q92902 700 aa17.64■□□□□ 0.42
LSM4-203ENST00000593829 TXNDC15Q96J42 360 aa17.64■□□□□ 0.42
LSM4-203ENST00000593829 TRIB1Q96RU8 372 aa17.64■□□□□ 0.42
LSM4-203ENST00000593829 CALHM2Q9HA72 323 aa17.64■□□□□ 0.42
LSM4-203ENST00000593829 ACOT13Q9NPJ3 140 aa17.64■□□□□ 0.42
LSM4-203ENST00000593829 NDRG4Q9ULP0 352 aaKnown RBP17.64■□□□□ 0.42
LSM4-203ENST00000593829 SAMD4AQ9UPU9 718 aaKnown RBP17.64■□□□□ 0.42
LSM4-203ENST00000593829 SEC14L5O43304 696 aa17.64■□□□□ 0.41
LSM4-203ENST00000593829 RGS10O43665 173 aa17.64■□□□□ 0.41
LSM4-203ENST00000593829 PRKACGP22612 351 aa17.64■□□□□ 0.41
LSM4-203ENST00000593829 PCGF2P35227 344 aa17.64■□□□□ 0.41
LSM4-203ENST00000593829 CLDN20P56880 219 aa17.64■□□□□ 0.41
LSM4-203ENST00000593829 ZNF181Q2M3W8 571 aa17.64■□□□□ 0.41
LSM4-203ENST00000593829 UBE2UQ5VVX9 321 aa17.64■□□□□ 0.41
LSM4-203ENST00000593829 NSUN5P2Q63ZY6 315 aa17.64■□□□□ 0.41
LSM4-203ENST00000593829 CHMP1BQ7LBR1 199 aa17.64■□□□□ 0.41
LSM4-203ENST00000593829 TSPYL5Q86VY4 417 aaPredicted RBP17.64■□□□□ 0.41
LSM4-203ENST00000593829 CYP4Z1Q86W10 505 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms