RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ZNF587BE7ETH6 402 aa16.49■□□□□ 0.23
CCDC43-205ENST00000592333 UBDO15205 165 aa16.49■□□□□ 0.23
CCDC43-205ENST00000592333 KRT33AO76009 404 aa16.49■□□□□ 0.23
CCDC43-205ENST00000592333 F12P00748 615 aaPredicted RBP16.49■□□□□ 0.23
CCDC43-205ENST00000592333 GKN3PP0CG01 181 aa16.49■□□□□ 0.23
CCDC43-205ENST00000592333 ETFAP13804 333 aa16.49■□□□□ 0.23
CCDC43-205ENST00000592333 MRPL19P49406 292 aaKnown RBP16.49■□□□□ 0.23
CCDC43-205ENST00000592333 POLR2JP52435 117 aaKnown RBP16.49■□□□□ 0.23
CCDC43-205ENST00000592333 SH3BGRP55822 239 aaPredicted RBP16.49■□□□□ 0.23
CCDC43-205ENST00000592333 CHRFAM7AQ494W8 412 aa16.49■□□□□ 0.23
CCDC43-205ENST00000592333 NXNQ6DKJ4 435 aa16.49■□□□□ 0.23
CCDC43-205ENST00000592333 GPAT4Q86UL3 456 aa16.49■□□□□ 0.23
CCDC43-205ENST00000592333 CADM2Q8N3J6 435 aa16.49■□□□□ 0.23
CCDC43-205ENST00000592333 FAM168AQ92567 244 aa16.49■□□□□ 0.23
CCDC43-205ENST00000592333 C3orf49Q96BT1 292 aa16.49■□□□□ 0.23
CCDC43-205ENST00000592333 AURKBQ96GD4 344 aaPredicted RBP16.49■□□□□ 0.23
CCDC43-205ENST00000592333 KATNB1Q9BVA0 655 aa16.49■□□□□ 0.23
CCDC43-205ENST00000592333 NKIRAS1Q9NYS0 192 aa16.49■□□□□ 0.23
CCDC43-205ENST00000592333 CDC42EP3Q9UKI2 254 aa16.49■□□□□ 0.23
CCDC43-205ENST00000592333 NDUFS8O00217 210 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 FRS3O43559 492 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 OR2T1O43869 369 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 PDE5AO76074 875 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 KITP10721 976 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 NCF2P19878 526 aaPredicted RBP16.48■□□□□ 0.23
CCDC43-205ENST00000592333 PTNP21246 168 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 SLC25A3Q00325 362 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 RGNQ15493 299 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 SWI5Q1ZZU3 235 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 TMEM249Q2WGJ8 235 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 C9orf135Q5VTT2 229 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 HMBOX1Q6NT76 420 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 C6orf89Q6UWU4 347 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 MIER2Q8N344 545 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 TMEM19Q96HH6 336 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 C1QTNF6Q9BXI9 259 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 MYOZ1Q9NP98 299 aaPredicted RBP16.48■□□□□ 0.23
CCDC43-205ENST00000592333 A4GALTQ9NPC4 353 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 ADPRHL2Q9NX46 363 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 CRNNQ9UBG3 495 aaPredicted RBP16.48■□□□□ 0.23
CCDC43-205ENST00000592333 RCE1Q9Y256 329 aa16.48■□□□□ 0.23
CCDC43-205ENST00000592333 HEATR1Q9H583 2144 aaKnown RBP16.48■□□□□ 0.23
CCDC43-205ENST00000592333 FBN3Q75N90 2809 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 FTCDNL1E5RQL4 147 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 AHSA1O95433 338 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 CRYAAP02489 173 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 ETS2P15036 469 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 TBRG1Q3YBR2 411 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 SLC9B1Q4ZJI4 515 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 ZNF311Q5JNZ3 666 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 C6orf52Q5T4I8 152 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 ANKRD16Q6P6B7 361 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 NET1Q7Z628 596 aaPredicted RBP16.47■□□□□ 0.23
CCDC43-205ENST00000592333 CLIP4Q8N3C7 705 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 LSMEM1Q8N8F7 131 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 OR1K1Q8NGR3 316 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 BBS10Q8TAM1 723 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 C10orf105Q8TEF2 133 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 SLC38A2Q96QD8 506 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 KCNS3Q9BQ31 491 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 LPAR3Q9UBY5 353 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 CHST2Q9Y4C5 530 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 FKBP7Q9Y680 259 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 GMEB1Q9Y692 573 aa16.47■□□□□ 0.23
CCDC43-205ENST00000592333 LOC102725191A0A1B0GVB3 256 aa16.46■□□□□ 0.23
CCDC43-205ENST00000592333 RPL36A-HNRNPH2H7BZ11 118 aa16.46■□□□□ 0.23
CCDC43-205ENST00000592333 CLIC1O00299 241 aa16.46■□□□□ 0.23
CCDC43-205ENST00000592333 FAM157CP0CG43 387 aa16.46■□□□□ 0.23
CCDC43-205ENST00000592333 UBE2NP61088 152 aaKnown RBP16.46■□□□□ 0.23
CCDC43-205ENST00000592333 BNIP2Q12982 314 aa16.46■□□□□ 0.23
CCDC43-205ENST00000592333 C6orf10Q5SRN2 563 aa16.46■□□□□ 0.23
CCDC43-205ENST00000592333 EPHX4Q8IUS5 362 aa16.46■□□□□ 0.23
CCDC43-205ENST00000592333 CCDC36Q8IYA8 594 aa16.46■□□□□ 0.23
CCDC43-205ENST00000592333 ZNF525Q8N782 197 aa16.46■□□□□ 0.23
CCDC43-205ENST00000592333 GTF2H4Q92759 462 aa16.46■□□□□ 0.23
CCDC43-205ENST00000592333 MOKQ9UQ07 419 aa16.46■□□□□ 0.23
CCDC43-205ENST00000592333 PCDHB14Q9Y5E9 798 aa16.46■□□□□ 0.23
CCDC43-205ENST00000592333 ATP6V1G2-DDX39BF2Z307 99 aa16.45■□□□□ 0.22
CCDC43-205ENST00000592333 GPRIN2O60269 458 aa16.45■□□□□ 0.22
CCDC43-205ENST00000592333 TGDSO95455 350 aa16.45■□□□□ 0.22
CCDC43-205ENST00000592333 PRG2P13727 222 aa16.45■□□□□ 0.22
CCDC43-205ENST00000592333 USF1P22415 310 aaPredicted RBP16.45■□□□□ 0.22
CCDC43-205ENST00000592333 PPIBP23284 216 aaKnown RBP16.45■□□□□ 0.22
CCDC43-205ENST00000592333 PRKAR1BP31321 381 aa16.45■□□□□ 0.22
CCDC43-205ENST00000592333 THBS2P35442 1172 aa16.45■□□□□ 0.22
CCDC43-205ENST00000592333 MST1LQ2TV78 715 aa16.45■□□□□ 0.22
CCDC43-205ENST00000592333 HIKESHIQ53FT3 197 aa16.45■□□□□ 0.22
CCDC43-205ENST00000592333 SERPINA11Q86U17 422 aa16.45■□□□□ 0.22
CCDC43-205ENST00000592333 OR4F15Q8NGB8 312 aa16.45■□□□□ 0.22
CCDC43-205ENST00000592333 DNAJA4Q8WW22 397 aaPredicted RBP16.45■□□□□ 0.22
CCDC43-205ENST00000592333 BCL2L2Q92843 193 aaPredicted RBP16.45■□□□□ 0.22
CCDC43-205ENST00000592333 TLCD1Q96CP7 247 aa16.45■□□□□ 0.22
CCDC43-205ENST00000592333 OXGR1Q96P68 337 aa16.45■□□□□ 0.22
CCDC43-205ENST00000592333 PAIP1Q9H074 479 aaKnown RBP16.45■□□□□ 0.22
CCDC43-205ENST00000592333 EVA1AQ9H8M9 152 aa16.45■□□□□ 0.22
CCDC43-205ENST00000592333 ALPK2Q86TB3 2170 aa16.45■□□□□ 0.22
CCDC43-205ENST00000592333 IGHV1-18A0A0C4DH31 117 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 VSTM5A8MXK1 200 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 B9A039 149 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 ZNF432O94892 652 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms