RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 TMEM225Q6GV28 225 aa16.07■□□□□ 0.16
CIRBP-237ENST00000592234 MSRB3Q8IXL7 192 aa16.07■□□□□ 0.16
CIRBP-237ENST00000592234 POMGNT2Q8NAT1 580 aa16.07■□□□□ 0.16
CIRBP-237ENST00000592234 HTRA1Q92743 480 aa16.07■□□□□ 0.16
CIRBP-237ENST00000592234 MAL2Q969L2 176 aa16.07■□□□□ 0.16
CIRBP-237ENST00000592234 ZNF385AQ96PM9 386 aaKnown RBP16.07■□□□□ 0.16
CIRBP-237ENST00000592234 CACYBPQ9HB71 228 aaKnown RBP16.07■□□□□ 0.16
CIRBP-237ENST00000592234 ADPRHL2Q9NX46 363 aa16.07■□□□□ 0.16
CIRBP-237ENST00000592234 SLC25A37Q9NYZ2 338 aa16.07■□□□□ 0.16
CIRBP-237ENST00000592234 PRDM4Q9UKN5 801 aa16.07■□□□□ 0.16
CIRBP-237ENST00000592234 A8MVM7 634 aa16.06■□□□□ 0.16
CIRBP-237ENST00000592234 EDF1O60869 148 aaKnown RBP16.06■□□□□ 0.16
CIRBP-237ENST00000592234 KRT33AO76009 404 aa16.06■□□□□ 0.16
CIRBP-237ENST00000592234 WNT11O96014 354 aa16.06■□□□□ 0.16
CIRBP-237ENST00000592234 TFPTP0C1Z6 253 aa16.06■□□□□ 0.16
CIRBP-237ENST00000592234 HOXB9P17482 250 aaPredicted RBP16.06■□□□□ 0.16
CIRBP-237ENST00000592234 ZSWIM7Q19AV6 140 aa16.06■□□□□ 0.16
CIRBP-237ENST00000592234 C1QTNF12Q5T7M4 302 aa16.06■□□□□ 0.16
CIRBP-237ENST00000592234 RNF220Q5VTB9 566 aa16.06■□□□□ 0.16
CIRBP-237ENST00000592234 CXXC5Q7LFL8 322 aaKnown RBP16.06■□□□□ 0.16
CIRBP-237ENST00000592234 ABHD12BQ7Z5M8 362 aaPredicted RBP16.06■□□□□ 0.16
CIRBP-237ENST00000592234 ZIC4Q8N9L1 334 aa16.06■□□□□ 0.16
CIRBP-237ENST00000592234 OR10H5Q8NGA6 315 aa16.06■□□□□ 0.16
CIRBP-237ENST00000592234 PIF1Q9H611 641 aa16.06■□□□□ 0.16
CIRBP-237ENST00000592234 ARMC7Q9H6L4 198 aa16.06■□□□□ 0.16
CIRBP-237ENST00000592234 ZNF446Q9NWS9 450 aa16.06■□□□□ 0.16
CIRBP-237ENST00000592234 THUMPD1Q9NXG2 353 aaKnown RBP16.06■□□□□ 0.16
CIRBP-237ENST00000592234 ZNF232Q9UNY5 417 aa16.06■□□□□ 0.16
CIRBP-237ENST00000592234 A0A0G2JND7 137 aa16.05■□□□□ 0.16
CIRBP-237ENST00000592234 H7C417 338 aa16.05■□□□□ 0.16
CIRBP-237ENST00000592234 FRS3O43559 492 aa16.05■□□□□ 0.16
CIRBP-237ENST00000592234 BMP4P12644 408 aa16.05■□□□□ 0.16
CIRBP-237ENST00000592234 ATP4BP51164 291 aa16.05■□□□□ 0.16
CIRBP-237ENST00000592234 CHRNB3Q05901 458 aa16.05■□□□□ 0.16
CIRBP-237ENST00000592234 C10orf111Q8N326 155 aa16.05■□□□□ 0.16
CIRBP-237ENST00000592234 CLIP4Q8N3C7 705 aa16.05■□□□□ 0.16
CIRBP-237ENST00000592234 RAD21L1Q9H4I0 556 aa16.05■□□□□ 0.16
CIRBP-237ENST00000592234 SLC52A3Q9NQ40 469 aa16.05■□□□□ 0.16
CIRBP-237ENST00000592234 VAPAQ9P0L0 249 aa16.05■□□□□ 0.16
CIRBP-237ENST00000592234 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.05■□□□□ 0.16
CIRBP-237ENST00000592234 A0A0G2JPF8 293 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 HNRNPCL2B2RXH8 293 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 HNRNPCL3B7ZW38 293 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 ATP6V1G2-DDX39BF2Z307 99 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 GPRIN2O60269 458 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 HNRNPCL1O60812 293 aaKnown RBP16.04■□□□□ 0.16
CIRBP-237ENST00000592234 VAMP5O95183 116 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 HNRNPCL4P0DMR1 293 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 PRG2P13727 222 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 APOBEC3AP31941 199 aaPredicted RBP16.04■□□□□ 0.16
CIRBP-237ENST00000592234 HIKESHIQ53FT3 197 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 LRIF1Q5T3J3 769 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 C1orf140Q5VVS0 124 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 HMBOX1Q6NT76 420 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 HIPK1Q86Z02 1210 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 ZNF525Q8N782 197 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 NFKBIDQ8NI38 313 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 SPATA9Q9BWV2 254 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 TMEM45AQ9NWC5 275 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 MOKQ9UQ07 419 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 IFT52Q9Y366 437 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 PMF1-BGLAPU3KQ54 211 aa16.04■□□□□ 0.16
CIRBP-237ENST00000592234 FBN1P35555 2871 aaKnown RBP16.04■□□□□ 0.16
CIRBP-237ENST00000592234 ATRQ13535 2644 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 ELOA3DA6NLF2 546 aaPredicted RBP16.03■□□□□ 0.16
CIRBP-237ENST00000592234 A8MV72 311 aaPredicted RBP16.03■□□□□ 0.16
CIRBP-237ENST00000592234 C5orf58C9J3I9 102 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 ZNF587BE7ETH6 402 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 SLC25A16P16260 332 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 SELENOPP49908 381 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 P2RY4P51582 365 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 ELOA3BQ3SY89 546 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 ZNF311Q5JNZ3 666 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 GCNT6Q5T4J0 391 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 PRAMEF8Q5VWM4 474 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 PRAMEF7Q5VXH5 474 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 CREB3L2Q70SY1 520 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 SERPINA11Q86U17 422 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 ELOA3Q8NG57 546 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 STK35Q8TDR2 534 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 FAM168AQ92567 244 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 C3orf49Q96BT1 292 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 TNFRSF13CQ96RJ3 184 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 IKZF5Q9H5V7 419 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 A4GALTQ9NPC4 353 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 OBP2BQ9NPH6 170 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 CHST2Q9Y4C5 530 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 COL6A5A8TX70 2615 aa16.03■□□□□ 0.16
CIRBP-237ENST00000592234 CUBNO60494 3623 aa16.02■□□□□ 0.16
CIRBP-237ENST00000592234 A0A096LNT2 108 aa16.02■□□□□ 0.16
CIRBP-237ENST00000592234 AHSA1O95433 338 aa16.02■□□□□ 0.16
CIRBP-237ENST00000592234 IFNA2P01563 188 aa16.02■□□□□ 0.16
CIRBP-237ENST00000592234 HOXC5Q00444 222 aa16.02■□□□□ 0.16
CIRBP-237ENST00000592234 LOXL1Q08397 574 aaPredicted RBP16.02■□□□□ 0.16
CIRBP-237ENST00000592234 FADDQ13158 208 aa16.02■□□□□ 0.16
CIRBP-237ENST00000592234 TMEM249Q2WGJ8 235 aa16.02■□□□□ 0.16
CIRBP-237ENST00000592234 TBRG1Q3YBR2 411 aa16.02■□□□□ 0.16
CIRBP-237ENST00000592234 CHRFAM7AQ494W8 412 aa16.02■□□□□ 0.16
CIRBP-237ENST00000592234 NIPAL3Q6P499 406 aa16.02■□□□□ 0.16
CIRBP-237ENST00000592234 PODNL1Q6PEZ8 512 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms