RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 FAM69AQ5T7M9 428 aa24■■□□□ 1.43
SMAD4-213ENST00000591914 C20orf204Q6ZNR8 217 aa24■■□□□ 1.43
SMAD4-213ENST00000591914 SSX8Q7RTT4 187 aa24■■□□□ 1.43
SMAD4-213ENST00000591914 TAAR8Q969N4 342 aa24■■□□□ 1.43
SMAD4-213ENST00000591914 SLC25A36Q96CQ1 311 aa24■■□□□ 1.43
SMAD4-213ENST00000591914 SLC7A10Q9NS82 523 aa24■■□□□ 1.43
SMAD4-213ENST00000591914 GID8Q9NWU2 228 aa24■■□□□ 1.43
SMAD4-213ENST00000591914 SELENONQ9NZV5 590 aa24■■□□□ 1.43
SMAD4-213ENST00000591914 ROS1P08922 2347 aa23.99■■□□□ 1.43
SMAD4-213ENST00000591914 PLAUP00749 431 aa23.99■■□□□ 1.43
SMAD4-213ENST00000591914 NPTX1Q15818 432 aa23.99■■□□□ 1.43
SMAD4-213ENST00000591914 NCMAPQ5T1S8 102 aa23.99■■□□□ 1.43
SMAD4-213ENST00000591914 TSPO2Q5TGU0 170 aa23.99■■□□□ 1.43
SMAD4-213ENST00000591914 CREB3L2Q70SY1 520 aa23.99■■□□□ 1.43
SMAD4-213ENST00000591914 AAED1Q7RTV5 226 aa23.99■■□□□ 1.43
SMAD4-213ENST00000591914 OR6T1Q8NGN1 323 aa23.99■■□□□ 1.43
SMAD4-213ENST00000591914 TRAV36DV7A0A075B6V5 113 aa23.98■■□□□ 1.43
SMAD4-213ENST00000591914 RAD51DO75771 328 aa23.98■■□□□ 1.43
SMAD4-213ENST00000591914 ITGA5P08648 1049 aa23.98■■□□□ 1.43
SMAD4-213ENST00000591914 CDH12P55289 794 aa23.98■■□□□ 1.43
SMAD4-213ENST00000591914 FOXG1P55316 489 aaPredicted RBP23.98■■□□□ 1.43
SMAD4-213ENST00000591914 PPA1Q15181 289 aa23.98■■□□□ 1.43
SMAD4-213ENST00000591914 ZNF613Q6PF04 617 aa23.98■■□□□ 1.43
SMAD4-213ENST00000591914 P3H2Q8IVL5 708 aa23.98■■□□□ 1.43
SMAD4-213ENST00000591914 MUCL1Q96DR8 90 aa23.98■■□□□ 1.43
SMAD4-213ENST00000591914 ZNF583Q96ND8 569 aa23.98■■□□□ 1.43
SMAD4-213ENST00000591914 MCHR1Q99705 422 aa23.98■■□□□ 1.43
SMAD4-213ENST00000591914 PIP5K1AQ99755 562 aa23.98■■□□□ 1.43
SMAD4-213ENST00000591914 ESRP2Q9H6T0 727 aaKnown RBP23.98■■□□□ 1.43
SMAD4-213ENST00000591914 VPS13CQ709C8 3753 aa23.97■■□□□ 1.43
SMAD4-213ENST00000591914 CIB4A0PJX0 185 aa23.97■■□□□ 1.43
SMAD4-213ENST00000591914 CCT8L1PA6NM43 557 aa23.97■■□□□ 1.43
SMAD4-213ENST00000591914 GTF2E2P29084 291 aaKnown RBP23.97■■□□□ 1.43
SMAD4-213ENST00000591914 VEZF1Q14119 521 aa23.97■■□□□ 1.43
SMAD4-213ENST00000591914 EPHX4Q8IUS5 362 aa23.97■■□□□ 1.43
SMAD4-213ENST00000591914 OR4D11Q8NGI4 311 aa23.97■■□□□ 1.43
SMAD4-213ENST00000591914 OR6S1Q8NH40 331 aa23.97■■□□□ 1.43
SMAD4-213ENST00000591914 RP9Q8TA86 221 aaKnown RBP23.97■■□□□ 1.43
SMAD4-213ENST00000591914 RASSF5Q8WWW0 418 aa23.97■■□□□ 1.43
SMAD4-213ENST00000591914 PIGTQ969N2 578 aa23.97■■□□□ 1.43
SMAD4-213ENST00000591914 RCN3Q96D15 328 aa23.97■■□□□ 1.43
SMAD4-213ENST00000591914 MUS81Q96NY9 551 aa23.97■■□□□ 1.43
SMAD4-213ENST00000591914 AMBRA1Q9C0C7 1298 aa23.97■■□□□ 1.43
SMAD4-213ENST00000591914 SLCO5A1Q9H2Y9 848 aa23.97■■□□□ 1.43
SMAD4-213ENST00000591914 UPB1Q9UBR1 384 aa23.97■■□□□ 1.43
SMAD4-213ENST00000591914 SEC14L4Q9UDX3 406 aa23.97■■□□□ 1.43
SMAD4-213ENST00000591914 ZNF469Q96JG9 3925 aaPredicted RBP23.97■■□□□ 1.43
SMAD4-213ENST00000591914 CCDC22O60826 627 aa23.96■■□□□ 1.43
SMAD4-213ENST00000591914 GABRA6Q16445 453 aa23.96■■□□□ 1.43
SMAD4-213ENST00000591914 OR7E24Q6IFN5 339 aa23.96■■□□□ 1.43
SMAD4-213ENST00000591914 ERICH5Q6P6B1 374 aa23.96■■□□□ 1.43
SMAD4-213ENST00000591914 TGIF2LYQ8IUE0 185 aa23.96■■□□□ 1.43
SMAD4-213ENST00000591914 POU5F2Q8N7G0 328 aa23.96■■□□□ 1.43
SMAD4-213ENST00000591914 POMGNT2Q8NAT1 580 aa23.96■■□□□ 1.43
SMAD4-213ENST00000591914 RNF217Q8TC41 542 aa23.96■■□□□ 1.43
SMAD4-213ENST00000591914 SLC26A7Q8TE54 656 aa23.96■■□□□ 1.43
SMAD4-213ENST00000591914 TMEM43Q9BTV4 400 aa23.96■■□□□ 1.43
SMAD4-213ENST00000591914 USP22Q9UPT9 525 aa23.96■■□□□ 1.43
SMAD4-213ENST00000591914 B3GALT5Q9Y2C3 310 aa23.96■■□□□ 1.43
SMAD4-213ENST00000591914 RNF115Q9Y4L5 304 aa23.96■■□□□ 1.43
SMAD4-213ENST00000591914 MED13LQ71F56 2210 aa23.96■■□□□ 1.43
SMAD4-213ENST00000591914 M0R082 166 aa23.95■■□□□ 1.42
SMAD4-213ENST00000591914 HS3ST1O14792 307 aa23.95■■□□□ 1.42
SMAD4-213ENST00000591914 AIM2O14862 343 aa23.95■■□□□ 1.42
SMAD4-213ENST00000591914 BSPH1Q075Z2 132 aa23.95■■□□□ 1.42
SMAD4-213ENST00000591914 ADAM5Q6NVV9 412 aa23.95■■□□□ 1.42
SMAD4-213ENST00000591914 LINC00114Q6XXX2 140 aa23.95■■□□□ 1.42
SMAD4-213ENST00000591914 SPATA21Q7Z572 469 aa23.95■■□□□ 1.42
SMAD4-213ENST00000591914 RBM45Q8IUH3 476 aaKnown RBP23.95■■□□□ 1.42
SMAD4-213ENST00000591914 C1orf162Q8NEQ5 155 aaPredicted RBP23.95■■□□□ 1.42
SMAD4-213ENST00000591914 ZNF417Q8TAU3 575 aa23.95■■□□□ 1.42
SMAD4-213ENST00000591914 IGFBPL1Q8WX77 278 aa23.95■■□□□ 1.42
SMAD4-213ENST00000591914 ZNF587Q96SQ5 575 aaPredicted RBP23.95■■□□□ 1.42
SMAD4-213ENST00000591914 EPYCQ99645 322 aa23.95■■□□□ 1.42
SMAD4-213ENST00000591914 CCL19Q99731 98 aa23.95■■□□□ 1.42
SMAD4-213ENST00000591914 PCDHAC1Q9H158 963 aa23.95■■□□□ 1.42
SMAD4-213ENST00000591914 NPAP1Q9NZP6 1156 aa23.95■■□□□ 1.42
SMAD4-213ENST00000591914 B3GAT1Q9P2W7 334 aa23.95■■□□□ 1.42
SMAD4-213ENST00000591914 DSCAMO60469 2012 aa23.94■■□□□ 1.42
SMAD4-213ENST00000591914 DPRXA6NFQ7 191 aa23.94■■□□□ 1.42
SMAD4-213ENST00000591914 CHP2O43745 196 aa23.94■■□□□ 1.42
SMAD4-213ENST00000591914 CD3EP07766 207 aa23.94■■□□□ 1.42
SMAD4-213ENST00000591914 MPGP29372 298 aa23.94■■□□□ 1.42
SMAD4-213ENST00000591914 GRPRP30550 384 aa23.94■■□□□ 1.42
SMAD4-213ENST00000591914 MFSD13AQ14CX5 517 aa23.94■■□□□ 1.42
SMAD4-213ENST00000591914 ENTPD8Q5MY95 495 aa23.94■■□□□ 1.42
SMAD4-213ENST00000591914 H1FNTQ75WM6 255 aaPredicted RBP23.94■■□□□ 1.42
SMAD4-213ENST00000591914 KDM8Q8N371 416 aa23.94■■□□□ 1.42
SMAD4-213ENST00000591914 ZNF611Q8N823 705 aa23.94■■□□□ 1.42
SMAD4-213ENST00000591914 ADPRHL1Q8NDY3 354 aa23.94■■□□□ 1.42
SMAD4-213ENST00000591914 LILRB1Q8NHL6 650 aaPredicted RBP23.94■■□□□ 1.42
SMAD4-213ENST00000591914 VANGL1Q8TAA9 524 aaPredicted RBP23.94■■□□□ 1.42
SMAD4-213ENST00000591914 SLC41A3Q96GZ6 507 aa23.94■■□□□ 1.42
SMAD4-213ENST00000591914 OXGR1Q96P68 337 aa23.94■■□□□ 1.42
SMAD4-213ENST00000591914 SLC25A15Q9Y619 301 aa23.94■■□□□ 1.42
SMAD4-213ENST00000591914 LOC102725191A0A1B0GVB3 256 aa23.93■■□□□ 1.42
SMAD4-213ENST00000591914 CPSF4LA6NMK7 179 aaKnown RBP23.93■■□□□ 1.42
SMAD4-213ENST00000591914 FAM220BPB1ANY3 271 aa23.93■■□□□ 1.42
SMAD4-213ENST00000591914 LYPD3O95274 346 aa23.93■■□□□ 1.42
SMAD4-213ENST00000591914 BGLAPP02818 100 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms