RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 IFNEQ86WN2 208 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 RIBC1Q8N443 379 aaPredicted RBP6.72□□□□□ -1.33
VMP1-213ENST00000591877 OR2M3Q8NG83 312 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 TWIST2Q8WVJ9 160 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 PIK3R3Q92569 461 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 RNASE6Q93091 150 aaKnown RBP6.72□□□□□ -1.33
VMP1-213ENST00000591877 PKNOX2Q96KN3 472 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 GPATCH1Q9BRR8 931 aaKnown RBP6.72□□□□□ -1.33
VMP1-213ENST00000591877 HDHD5Q9BXW7 423 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 TRIM2Q9C040 744 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 LIME1Q9H400 295 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 DSN1Q9H410 356 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 REEP4Q9H6H4 257 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 DDX18Q9NVP1 670 aaKnown RBP6.72□□□□□ -1.33
VMP1-213ENST00000591877 MED11Q9P086 117 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 RPH3AQ9Y2J0 694 aaPredicted RBP6.72□□□□□ -1.33
VMP1-213ENST00000591877 TNFRSF18Q9Y5U5 241 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 SNX8Q9Y5X2 465 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 H0YC42 278 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 RCBTB2O95199 551 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 UTS2O95399 124 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 BPGMP07738 259 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 PRPS2P11908 318 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 NEFHP12036 1026 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 FPR3P25089 353 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 GABRA3P34903 492 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 SUCLG1P53597 346 aaKnown RBP6.71□□□□□ -1.34
VMP1-213ENST00000591877 TPD52P55327 224 aaPredicted RBP6.71□□□□□ -1.34
VMP1-213ENST00000591877 DSCR4P56555 118 aaPredicted RBP6.71□□□□□ -1.34
VMP1-213ENST00000591877 MRPS22P82650 360 aaKnown RBP6.71□□□□□ -1.34
VMP1-213ENST00000591877 HNRNPA0Q13151 305 aaKnown RBP6.71□□□□□ -1.34
VMP1-213ENST00000591877 STX5Q13190 355 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 RCAN2Q14206 197 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 DECR1Q16698 335 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 C6orf136Q5SQH8 315 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 ENPP6Q6UWR7 440 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 BCDIN3DQ7Z5W3 292 aaKnown RBP6.71□□□□□ -1.34
VMP1-213ENST00000591877 GALNT10Q86SR1 603 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 TMEM200AQ86VY9 491 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 C11orf65Q8NCR3 313 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 OR4K17Q8NGC6 315 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 OR5M1Q8NGP8 315 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 OR4C3Q8NH37 302 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 FBXO30Q8TB52 745 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 FAM110BQ8TC76 370 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 AGR3Q8TD06 166 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 DUSP19Q8WTR2 217 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 PPCDCQ96CD2 204 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 C16orf58Q96GQ5 468 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 SFXN2Q96NB2 322 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 KLHDC3Q9BQ90 382 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 TMEM109Q9BVC6 243 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 ROPN1BQ9BZX4 212 aaPredicted RBP6.71□□□□□ -1.34
VMP1-213ENST00000591877 ROPN1Q9HAT0 212 aaPredicted RBP6.71□□□□□ -1.34
VMP1-213ENST00000591877 Q9N2J8 555 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 MED4Q9NPJ6 270 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 EQTNQ9NQ60 294 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 SIRT3Q9NTG7 399 aaPredicted RBP6.71□□□□□ -1.34
VMP1-213ENST00000591877 ACSS1Q9NUB1 689 aaPredicted RBP6.71□□□□□ -1.34
VMP1-213ENST00000591877 FAM120CQ9NX05 1096 aaKnown RBP6.71□□□□□ -1.34
VMP1-213ENST00000591877 SH3BP4Q9P0V3 963 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 ATP6V1HQ9UI12 483 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 ZDHHC2Q9UIJ5 367 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 DKKL1Q9UK85 242 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 ABCG2Q9UNQ0 655 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 TMEM5Q9Y2B1 443 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 TMED5Q9Y3A6 229 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 ZNF337Q9Y3M9 751 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 ABCA4P78363 2273 aa6.71□□□□□ -1.34
VMP1-213ENST00000591877 PRRC2AP48634 2157 aaKnown RBP6.71□□□□□ -1.34
VMP1-213ENST00000591877 SETD2Q9BYW2 2564 aaPredicted RBP6.7□□□□□ -1.34
VMP1-213ENST00000591877 IGLV3-32A0A0A0MS00 114 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 OR2M5A3KFT3 312 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 LIPT2A6NK58 231 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 A6NNC1 897 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 EEF1E1-BLOC1S5C9J1V9 151 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 EEF1E1O43324 174 aaKnown RBP6.7□□□□□ -1.34
VMP1-213ENST00000591877 ITM2AO43736 263 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 PEX11AO75192 247 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 TNFSF13O75888 250 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 KCNK2O95069 426 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 ZWINTO95229 277 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 ANGPTL1O95841 491 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 HLA-DQA2P01906 255 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 HKR1P10072 659 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 LAMP1P11279 417 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 OPRM1P35372 400 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 CPOXP36551 454 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 RFX3P48380 749 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 ZNF84P51523 738 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 IST1P53990 364 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 NANOS3P60323 173 aaKnown RBP6.7□□□□□ -1.34
VMP1-213ENST00000591877 IFFO1Q0D2I5 559 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 IL13RA2Q14627 380 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 PTGR1Q14914 329 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 MFSD13AQ14CX5 517 aa6.7□□□□□ -1.34
VMP1-213ENST00000591877 DAZAP2Q15038 168 aaPredicted RBP6.7□□□□□ -1.34
VMP1-213ENST00000591877 ZNHIT3Q15649 155 aaPredicted RBP6.7□□□□□ -1.34
VMP1-213ENST00000591877 BCL2A1Q16548 175 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms