RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 A0A087WUJ7 227 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 A0A0B4J2E0 115 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 A0A1B0GX12 115 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 ZNF814B7Z6K7 855 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 LYZL6O75951 148 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 OR6A2O95222 327 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 CNOT4O95628 575 aaKnown RBP8.92□□□□□ -0.98
BRCA1-227ENST00000591849 ZNF682O95780 498 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 HIST1H2ABP04908 130 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 ZNF43P17038 809 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 PTNP21246 168 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 CRYGSP22914 178 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 DNASE1P24855 282 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 DNAJA1P31689 397 aaKnown RBP8.92□□□□□ -0.98
BRCA1-227ENST00000591849 SLC16A1P53985 500 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 RIPPLY3P57055 190 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 FAPQ12884 760 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 PMS2P3Q13401 168 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 SLC17A1Q14916 467 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 BEX5Q5H9J7 111 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 SWT1Q5T5J6 900 aaKnown RBP8.92□□□□□ -0.98
BRCA1-227ENST00000591849 GKAP1Q5VSY0 366 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-227ENST00000591849 FKBP9P1Q75LS8 142 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 H1FNTQ75WM6 255 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-227ENST00000591849 HIST3H2AQ7L7L0 130 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 ABHD12BQ7Z5M8 362 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-227ENST00000591849 PIGWQ7Z7B1 504 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 RBM45Q8IUH3 476 aaKnown RBP8.92□□□□□ -0.98
BRCA1-227ENST00000591849 GABRG1Q8N1C3 465 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 KDM8Q8N371 416 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 ADAMTS16Q8TE57 1224 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 HSD17B8Q92506 261 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 HIST1H2ACQ93077 130 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 S100PBPQ96BU1 408 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 CCT8L2Q96SF2 557 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 WFDC6Q9BQY6 131 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 RSPO3Q9BXY4 272 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-227ENST00000591849 ALG2Q9H553 416 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 TAGLN3Q9UI15 199 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 SLC7A7Q9UM01 511 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 FLVCR1Q9Y5Y0 555 aa8.92□□□□□ -0.98
BRCA1-227ENST00000591849 HIVEP1P15822 2718 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 M0R082 166 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 CXCR6O00574 342 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 CHP2O43745 196 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 AKAP8O43823 692 aaKnown RBP8.91□□□□□ -0.98
BRCA1-227ENST00000591849 TPST2O60704 377 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 SHOX2O60902 331 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-227ENST00000591849 NPIPB7O75200 414 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 HRGP04196 525 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 UMPSP11172 480 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 GGT1P19440 569 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 TNFRSF1BP20333 461 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 GRPRP30550 384 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 HOXC12P31275 282 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 CCKARP32238 428 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 OR1E2P47887 323 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 GSK3BP49841 420 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 MNAT1P51948 309 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 NR1H2P55055 460 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 SELENOWP63302 87 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 TGFBR3Q03167 851 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 EGR4Q05215 589 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 NPTX1Q15818 432 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 C9orf135Q5VTT2 229 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 NIPAL3Q6P499 406 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 LSRQ86X29 649 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-227ENST00000591849 ANKS4BQ8N8V4 417 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 POMGNT2Q8NAT1 580 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 CCDC197Q8NCU1 140 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 OR6S1Q8NH40 331 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 ZNF417Q8TAU3 575 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 NRGNQ92686 78 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 SLC41A3Q96GZ6 507 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 MPP4Q96JB8 637 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 OXGR1Q96P68 337 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 ZNF587Q96SQ5 575 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-227ENST00000591849 TMEM43Q9BTV4 400 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 PTDSS2Q9BVG9 487 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 SPAG4Q9NPE6 437 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 NDE1Q9NXR1 346 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 B3GALT5Q9Y2C3 310 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 CORINQ9Y5Q5 1042 aa8.91□□□□□ -0.98
BRCA1-227ENST00000591849 ANKHD1Q8IWZ3 2542 aaKnown RBP8.91□□□□□ -0.98
BRCA1-227ENST00000591849 MTORP42345 2549 aa8.9□□□□□ -0.98
BRCA1-227ENST00000591849 IGKV1D-42A0A075B6H8 117 aa8.9□□□□□ -0.98
BRCA1-227ENST00000591849 FAM221AA4D161 298 aa8.9□□□□□ -0.98
BRCA1-227ENST00000591849 OR6C65A6NJZ3 312 aa8.9□□□□□ -0.98
BRCA1-227ENST00000591849 ZNF726A6NNF4 738 aa8.9□□□□□ -0.98
BRCA1-227ENST00000591849 KPNA4O00629 521 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-227ENST00000591849 NME4O00746 187 aa8.9□□□□□ -0.98
BRCA1-227ENST00000591849 SLC43A1O75387 559 aa8.9□□□□□ -0.98
BRCA1-227ENST00000591849 RAD51DO75771 328 aa8.9□□□□□ -0.98
BRCA1-227ENST00000591849 SERPINI2O75830 405 aa8.9□□□□□ -0.98
BRCA1-227ENST00000591849 FAM107AO95990 144 aa8.9□□□□□ -0.98
BRCA1-227ENST00000591849 CH25HO95992 272 aa8.9□□□□□ -0.98
BRCA1-227ENST00000591849 CDH2P19022 906 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-227ENST00000591849 IGHV1-2P23083 117 aa8.9□□□□□ -0.98
BRCA1-227ENST00000591849 AHCYP23526 432 aa8.9□□□□□ -0.98
BRCA1-227ENST00000591849 CLDN17P56750 224 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms