RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 YLPM1P49750 1951 aaKnown RBP9.13□□□□□ -0.95
VPS4B-207ENST00000591519 ELOA3DA6NLF2 546 aaPredicted RBP9.12□□□□□ -0.95
VPS4B-207ENST00000591519 DYNC1I1O14576 645 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 SSX4O60224 188 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 KRT75O95678 551 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 CHRM4P08173 479 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 TACR3P29371 465 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 CRATP43155 626 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 GATA4P43694 442 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 ZNF83P51522 516 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 FOXG1P55316 489 aaPredicted RBP9.12□□□□□ -0.95
VPS4B-207ENST00000591519 OR2B6P58173 313 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 IRX1P78414 480 aaPredicted RBP9.12□□□□□ -0.95
VPS4B-207ENST00000591519 HPCAP84074 193 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 ELOA3BQ3SY89 546 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 PAGE3Q5JUK9 113 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 ZNF544Q6NX49 715 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 SLC22A25Q6T423 547 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 PAQR6Q6TCH4 344 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 SYT9Q86SS6 491 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 DEPDC4Q8N2C3 294 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 MUC15Q8N387 334 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 ANKFN1Q8N957 763 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 ZIC4Q8N9L1 334 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 ELOA3Q8NG57 546 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 GTF2H4Q92759 462 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 TMEM45BQ96B21 275 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 DDIT4LQ96D03 193 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 SF3B5Q9BWJ5 86 aaKnown RBP9.12□□□□□ -0.95
VPS4B-207ENST00000591519 CACNG6Q9BXT2 260 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 RABEP2Q9H5N1 569 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 TPT1P8Q9HAU6 139 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 SLC7A10Q9NS82 523 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 SLC9A8Q9Y2E8 581 aa9.12□□□□□ -0.95
VPS4B-207ENST00000591519 TMEM72A0PK05 275 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 ZC3H12DA2A288 527 aaKnown RBP9.11□□□□□ -0.95
VPS4B-207ENST00000591519 CFAP73A6NFT4 308 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 H7C417 338 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 AP3D1O14617 1153 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 DBIP07108 87 aaKnown RBP9.11□□□□□ -0.95
VPS4B-207ENST00000591519 NR2F1P10589 423 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 ETFAP13804 333 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 IL7RP16871 459 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 CCNA2P20248 432 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 PTNP21246 168 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 PAX7P23759 505 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 ACAA2P42765 397 aaKnown RBP9.11□□□□□ -0.95
VPS4B-207ENST00000591519 FABP6P51161 128 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 ATP4BP51164 291 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 SEC24CP53992 1094 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 TGFBR3Q03167 851 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 LOXL1Q08397 574 aaPredicted RBP9.11□□□□□ -0.95
VPS4B-207ENST00000591519 EPS8Q12929 822 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 GNA13Q14344 377 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 RAB35Q15286 201 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 MAPK11Q15759 364 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 SAMD5Q5TGI4 173 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 PODNL1Q6PEZ8 512 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 MSANTD1Q6ZTZ1 278 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 ZNF440Q8IYI8 595 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 FBXL14Q8N1E6 418 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 OR52E4Q8NGH9 312 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 TNFRSF13CQ96RJ3 184 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 SIKE1Q9BRV8 207 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 PAIP1Q9H074 479 aaKnown RBP9.11□□□□□ -0.95
VPS4B-207ENST00000591519 ZNF385DQ9H6B1 395 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 CCDC134Q9H6E4 229 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 SLC17A5Q9NRA2 495 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 YAE1D1Q9NRH1 226 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 SLAMF8Q9P0V8 285 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 UPB1Q9UBR1 384 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.11□□□□□ -0.95
VPS4B-207ENST00000591519 AMDHD2Q9Y303 409 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 PCDHB14Q9Y5E9 798 aa9.11□□□□□ -0.95
VPS4B-207ENST00000591519 DSPPQ9NZW4 1301 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 IGHV4-30-2A0A087WSY4 118 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 ELOA3CA0A087WX78 387 aaPredicted RBP9.1□□□□□ -0.95
VPS4B-207ENST00000591519 A0A096LPI6 279 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 A0A1W2PR80 420 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 CDHR4A6H8M9 788 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 LIPT2A6NK58 231 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 A8MV72 311 aaPredicted RBP9.1□□□□□ -0.95
VPS4B-207ENST00000591519 FAM229AH3BQW9 127 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 CLIC1O00299 241 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 GPRIN2O60269 458 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 IFNA2P01563 188 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 TFPTP0C1Z6 253 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 ZCCHC18P0CG32 403 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 UQCRBP14927 111 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 MPGP29372 298 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 APOBEC3AP31941 199 aaPredicted RBP9.1□□□□□ -0.95
VPS4B-207ENST00000591519 MRPL19P49406 292 aaKnown RBP9.1□□□□□ -0.95
VPS4B-207ENST00000591519 NUDT6P53370 316 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 MVDP53602 400 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 PRPS1P60891 318 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 DSTNP60981 165 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 ZSWIM7Q19AV6 140 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 MST1LQ2TV78 715 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 RPS26P11Q5JNZ5 115 aaPredicted RBP9.1□□□□□ -0.95
VPS4B-207ENST00000591519 MRPL2Q5T653 305 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms