RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 GIPC3Q8TF64 312 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 CENPNQ96H22 339 aaPredicted RBP12.18□□□□□ -0.46
VMP1-210ENST00000589823 FAM46AQ96IP4 442 aaKnown RBP12.18□□□□□ -0.46
VMP1-210ENST00000589823 ZNF587Q96SQ5 575 aaPredicted RBP12.18□□□□□ -0.46
VMP1-210ENST00000589823 PKP2Q99959 881 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 TTYH2Q9BSA4 534 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 CHST11Q9NPF2 352 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 MRPL39Q9NYK5 338 aaKnown RBP12.18□□□□□ -0.46
VMP1-210ENST00000589823 B3GALT5Q9Y2C3 310 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 CFAP46Q8IYW2 2715 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 GTF3C1Q12789 2109 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 MBD3L4A6NDZ8 208 aaPredicted RBP12.17□□□□□ -0.46
VMP1-210ENST00000589823 MBD3L3A6NE82 208 aaPredicted RBP12.17□□□□□ -0.46
VMP1-210ENST00000589823 MBD3L5A6NJ08 208 aaPredicted RBP12.17□□□□□ -0.46
VMP1-210ENST00000589823 AQP7P3A6NL99 342 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 KDM4EB2RXH2 506 aaPredicted RBP12.17□□□□□ -0.46
VMP1-210ENST00000589823 CYTIPO60759 359 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 FZD7O75084 574 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 AQP8O94778 261 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 VAMP5O95183 116 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 OR6A2O95222 327 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 BAG2O95816 211 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 TGM6O95932 706 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 PLGP00747 810 aaPredicted RBP12.17□□□□□ -0.46
VMP1-210ENST00000589823 IL2RAP01589 272 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 ZNF23P17027 643 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 MAKP20794 623 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 TIMP3P35625 211 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 OMPP47874 163 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 SLC9A3P48764 834 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 H3F3AP84243 136 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 RASGEF1BQ0VAM2 473 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 PMPCAQ10713 525 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 LAPTM4AQ15012 233 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 TAF11Q15544 211 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 ABLIM2Q6H8Q1 611 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 SHQ1Q6PI26 577 aaKnown RBP12.17□□□□□ -0.46
VMP1-210ENST00000589823 TMPRSS11FQ6ZWK6 438 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 NANOGNBQ7Z5D8 188 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 OAFQ86UD1 273 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 MEX3DQ86XN8 651 aaKnown RBP12.17□□□□□ -0.46
VMP1-210ENST00000589823 HIPK1Q86Z02 1210 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 ZDHHC13Q8IUH4 622 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 RPRMLQ8N4K4 120 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 LRRC17Q8N6Y2 441 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 C9orf106Q8NAJ2 232 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 ADPRHL1Q8NDY3 354 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 OR9Q2Q8NGE9 314 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 MBD3L2Q8NHZ7 208 aaPredicted RBP12.17□□□□□ -0.46
VMP1-210ENST00000589823 RNF128Q8TEB7 428 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 LIPHQ8WWY8 451 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 SDCCAG3Q96C92 435 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 NRBF2Q96F24 287 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 SEMA6AQ9H2E6 1030 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 NTN4Q9HB63 628 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 PDP1Q9P0J1 537 aaPredicted RBP12.17□□□□□ -0.46
VMP1-210ENST00000589823 KLHL9Q9P2J3 617 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 MGAT4BQ9UQ53 548 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 RASD1Q9Y272 281 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 MEMO1Q9Y316 297 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 ZGRF1Q86YA3 2104 aa12.17□□□□□ -0.46
VMP1-210ENST00000589823 ARRDC5A6NEK1 342 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 BLOC1S5-TXNDC5H3BN57 136 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 RCBTB2O95199 551 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 ASAH2BP0C7U1 165 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 ADORA3P0DMS8 318 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 GLI4P10075 376 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 KLK2P20151 261 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 RCN1Q15293 331 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 C4orf17Q53FE4 359 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 RIPPLY2Q5TAB7 128 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 HMBOX1Q6NT76 420 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 C1orf94Q6P1W5 598 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 PGBD2Q6P3X8 592 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 MTFR2Q6P444 385 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 ZER1Q7Z7L7 766 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 TMEM179BQ7Z7N9 219 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 GPAT4Q86UL3 456 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 FJX1Q86VR8 437 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 CCDC103Q8IW40 242 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 PQLC1Q8N2U9 271 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 SVOPLQ8N434 492 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 AQP11Q8NBQ7 271 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 ICA1LQ8NDH6 482 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 ABHD3Q8WU67 409 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 RND1Q92730 232 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 ZFP3Q96NJ6 502 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 DMRTA2Q96SC8 542 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 TACO1Q9BSH4 297 aaKnown RBP12.16□□□□□ -0.46
VMP1-210ENST00000589823 NDEL1Q9GZM8 345 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 RNF122Q9H9V4 155 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 GLRX2Q9NS18 164 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 KIF17Q9P2E2 1029 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 KLHL13Q9P2N7 655 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 SEC14L4Q9UDX3 406 aa12.16□□□□□ -0.46
VMP1-210ENST00000589823 UNC119BA6NIH7 251 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 ZNF814B7Z6K7 855 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 G3V2T6 193 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 PLPP3O14495 311 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 CDC42EP2O14613 210 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms