RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 LYNX1P0DP58 116 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 HPGDP15428 266 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 EFNA1P20827 205 aaPredicted RBP5.28□□□□□ -1.56
VPS25-204ENST00000589577 IL12AP29459 219 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 FRKP42685 505 aaPredicted RBP5.28□□□□□ -1.56
VPS25-204ENST00000589577 CRATP43155 626 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 SNRPD2P62316 118 aaKnown RBP5.28□□□□□ -1.56
VPS25-204ENST00000589577 HBA1P69905 142 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 MRPS35P82673 323 aaKnown RBP5.28□□□□□ -1.56
VPS25-204ENST00000589577 CHRNEQ04844 493 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 EFR3AQ14156 821 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 LASP1Q14847 261 aaKnown RBP5.28□□□□□ -1.56
VPS25-204ENST00000589577 LTB4RQ15722 352 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 ZSCAN26Q16670 478 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 TRMT12Q53H54 448 aaKnown RBP5.28□□□□□ -1.56
VPS25-204ENST00000589577 ZNF385BQ569K4 471 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 ZNF628Q5EBL2 1059 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 SAMD4BQ5PRF9 694 aaKnown RBP5.28□□□□□ -1.56
VPS25-204ENST00000589577 HBMQ6B0K9 141 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 FAM180BQ6P0A1 224 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 ERICH5Q6P6B1 374 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 SLC2A7Q6PXP3 512 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 ZNF771Q7L3S4 317 aaPredicted RBP5.28□□□□□ -1.56
VPS25-204ENST00000589577 SSX8Q7RTT4 187 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 C16orf62Q7Z3J2 963 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 KRT73Q86Y46 540 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 FUNDC1Q8IVP5 155 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 SLC30A8Q8IWU4 369 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 CLECL1Q8IZS7 167 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 PGAM4Q8N0Y7 254 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 ZCCHC24Q8N2G6 241 aaKnown RBP5.28□□□□□ -1.56
VPS25-204ENST00000589577 ZNF786Q8N393 782 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 BPIFB2Q8N4F0 458 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 SIGLECL1Q8N7X8 197 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 COX18Q8N8Q8 333 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 CDRT4Q8N9R6 151 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 SYT14Q8NB59 555 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 OR4N2Q8NGD1 307 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 OR52R1Q8NGF1 315 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 OR8J3Q8NGG0 315 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 OR5AK3PQ8NH89 298 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 SLC9A6Q92581 669 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 GTF2H4Q92759 462 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 ELP4Q96EB1 424 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 RAB3IPQ96QF0 476 aaPredicted RBP5.28□□□□□ -1.56
VPS25-204ENST00000589577 SPATA9Q9BWV2 254 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 C1QTNF6Q9BXI9 259 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 ACTRT3Q9BYD9 372 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 TRIM15Q9C019 465 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 ARMC7Q9H6L4 198 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 NARFLQ9H6Q4 476 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 TMEM185BQ9H7F4 350 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 CXorf36Q9H7Y0 433 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 TPT1P8Q9HAU6 139 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 HHATLQ9HCP6 504 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 PAQR5Q9NXK6 330 aaPredicted RBP5.28□□□□□ -1.56
VPS25-204ENST00000589577 P2RX2Q9UBL9 471 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 C19orf53Q9UNZ5 99 aaPredicted RBP5.28□□□□□ -1.56
VPS25-204ENST00000589577 ANGPT4Q9Y264 503 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 VDAC3Q9Y277 283 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 DNAH9Q9NYC9 4486 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 NOTCH3Q9UM47 2321 aa5.28□□□□□ -1.56
VPS25-204ENST00000589577 IGLV3-32A0A0A0MS00 114 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 C3orf80F5H4A9 247 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 M0QZ24 198 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 PRSS23O95084 383 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 BCL10O95999 233 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 IFNA14P01570 189 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 HMGN2P05204 90 aaKnown RBP5.27□□□□□ -1.57
VPS25-204ENST00000589577 GSNP06396 782 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 YES1P07947 543 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 RNASE1P07998 156 aaKnown RBP5.27□□□□□ -1.57
VPS25-204ENST00000589577 GAAP10253 952 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 NR2F1P10589 423 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 IFNGR1P15260 489 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 MATN1P21941 496 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 OMGP23515 440 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 SLC6A2P23975 617 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 IL12BP29460 328 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 CLK3P49761 638 aaKnown RBP5.27□□□□□ -1.57
VPS25-204ENST00000589577 PPOXP50336 477 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 IDH3GP51553 393 aaPredicted RBP5.27□□□□□ -1.57
VPS25-204ENST00000589577 PNLIPRP2P54317 469 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 FOXG1P55316 489 aaPredicted RBP5.27□□□□□ -1.57
VPS25-204ENST00000589577 DSTNP60981 165 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 PSME3P61289 254 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 LMO4P61968 165 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 RBBP4Q09028 425 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 RNPS1Q15287 305 aaKnown RBP5.27□□□□□ -1.57
VPS25-204ENST00000589577 ADIPOQQ15848 244 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 DECR1Q16698 335 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 SPATS1Q496A3 300 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 LRIF1Q5T3J3 769 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 GCNT6Q5T4J0 391 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 LCE2DQ5TA82 110 aaPredicted RBP5.27□□□□□ -1.57
VPS25-204ENST00000589577 ASPHD2Q6ICH7 369 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 CDC73Q6P1J9 531 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 KLHL17Q6TDP4 642 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 APOOLQ6UXV4 268 aa5.27□□□□□ -1.57
VPS25-204ENST00000589577 ESPNLQ6ZVH7 1005 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms