RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	OIP5	O43482	229 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	AKR7A2	O43488	359 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	ICOSLG	O75144	302 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	IFNA7	P01567	189 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	GSTM3	P21266	225 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	TBXA2R	P21731	343 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	FPR3	P25089	353 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	ABCD3	P28288	659 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	IFNGR2	P38484	337 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	RPS19	P39019	145 aa	Known RBP	14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	CCDC157	Q569K6	752 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	HLA-DQA1	Q5Y7H0	255 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	TMEM65	Q6PI78	240 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	CPEB2	Q7Z5Q1	589 aa	Known RBP	14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	C19orf18	Q8NEA5	215 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	AKAP1	Q92667	903 aa	Known RBP eCLIP	14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	C8orf44	Q96CB5	159 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	MARVELD1	Q9BSK0	173 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	ZNF426	Q9BUY5	554 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	RTN4R	Q9BZR6	473 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	SLC35A3	Q9Y2D2	325 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	LOXL2	Q9Y4K0	774 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	FKBP7	Q9Y680	259 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	PCNX2	A6NKB5	2137 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	CDC42EP2	O14613	210 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	TOR1A	O14656	332 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	CHP2	O43745	196 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	REM1	O75628	298 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	GPX5	O75715	221 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	KLF7	O75840	302 aa	Predicted RBP	14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	KLK3	P07288	261 aa	Predicted RBP	14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	LCN1	P31025	176 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	GPR4	P46093	362 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	CDC42	P60953	191 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	BTG1	P62324	171 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	GRK1	Q15835	563 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	DDI2	Q5TDH0	399 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	RASSF6	Q6ZTQ3	369 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	RRM2B	Q7LG56	351 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	ZNF550	Q7Z398	422 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	LAX1	Q8IWV1	398 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	SLC34A3	Q8N130	599 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	GATS	Q8NAP1	163 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	ZNF527	Q8NB42	609 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	OR8D4	Q8NGM9	314 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	GRHL3	Q8TE85	626 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	TMEM239	Q8WW34	195 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	MR1	Q95460	341 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	TRIM2	Q9C040	744 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	EGLN3	Q9H6Z9	239 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	TMEM27	Q9HBJ8	222 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	PARD6A	Q9NPB6	346 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	GPR83	Q9NYM4	423 aa		14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	MRTO4	Q9UKD2	239 aa	Known RBP	14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	NXT1	Q9UKK6	140 aa	Known RBP	14.06	□□□□□ -0.16
DDX39A-209	ENST00000589318	TMEM200C	A6NKL6	621 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	C4orf47	A7E2U8	309 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	ZNF354A	O60765	605 aa	Predicted RBP	14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	WDPCP	O95876	746 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	TPO	P07202	933 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	UMOD	P07911	640 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	TSPAN19	P0C672	248 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	CDK5	Q00535	292 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	PLCXD2	Q0VAA5	305 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	SKP2	Q13309	424 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	MED22	Q15528	200 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	ISX	Q2M1V0	245 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	ZMAT1	Q5H9K5	638 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	RNLS	Q5VYX0	342 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	KIRREL2	Q6UWL6	708 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	ARSK	Q6UWY0	536 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	C16orf47	Q6ZP98	133 aa	Predicted RBP	14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	GPAT4	Q86UL3	456 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	RNF113B	Q8IZP6	322 aa	Known RBP	14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	IQCF1	Q8N6M8	205 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	ZNF680	Q8NEM1	530 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	PFN4	Q8NHR9	129 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	SLC25A46	Q96AG3	418 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	MEPE	Q9NQ76	525 aa	Predicted RBP	14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	C20orf141	Q9NUB4	165 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	IMPAD1	Q9NX62	359 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	LOC102723996	A0A087X1L8	192 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318		A0A1W2PNU3	283 aa	Predicted RBP	14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	SCD	O00767	359 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	PLA2G10	O15496	165 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	IL12B	P29460	328 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	GIPR	P48546	466 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	PNLIPRP2	P54317	469 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	SLC26A5	P58743	744 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	E2F1	Q01094	437 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	TCF15	Q12870	199 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	AANAT	Q16613	207 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	MEDAG	Q5VYS4	303 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	TRIQK	Q629K1	86 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	PLAG1	Q6DJT9	500 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	ACSM5	Q6NUN0	579 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	CBLN3	Q6UW01	205 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	LINC00114	Q6XXX2	140 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	NUBPL	Q8TB37	319 aa		14.05	□□□□□ -0.16
DDX39A-209	ENST00000589318	CREB3L1	Q96BA8	519 aa		14.05	□□□□□ -0.16

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms