RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 GLIPR1L2Q4G1C9 344 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 COQ5Q5HYK3 327 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 SWT1Q5T5J6 900 aaKnown RBP12.71□□□□□ -0.38
DDX39A-208ENST00000588692 FAM69AQ5T7M9 428 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 KLHL17Q6TDP4 642 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 TMEM108Q6UXF1 575 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 NET1Q7Z628 596 aaPredicted RBP12.71□□□□□ -0.38
DDX39A-208ENST00000588692 RANBP3LQ86VV4 465 aaPredicted RBP12.71□□□□□ -0.38
DDX39A-208ENST00000588692 LSRQ86X29 649 aaPredicted RBP12.71□□□□□ -0.38
DDX39A-208ENST00000588692 KBTBD8Q8NFY9 601 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 SLC47A1Q96FL8 570 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 ZNF385AQ96PM9 386 aaKnown RBP12.71□□□□□ -0.38
DDX39A-208ENST00000588692 KAT8Q9H7Z6 458 aaKnown RBP12.71□□□□□ -0.38
DDX39A-208ENST00000588692 TMEM27Q9HBJ8 222 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 ZNF446Q9NWS9 450 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 NPAP1Q9NZP6 1156 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 SELENONQ9NZV5 590 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 MGAT4BQ9UQ53 548 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 AMDHD2Q9Y303 409 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 SLC25A15Q9Y619 301 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 NF1P21359 2839 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 VPS13CQ709C8 3753 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 CADP27708 2225 aa12.7□□□□□ -0.38
DDX39A-208ENST00000588692 A0A0B4J2E0 115 aa12.7□□□□□ -0.38
DDX39A-208ENST00000588692 A0A1B0GX12 115 aa12.7□□□□□ -0.38
DDX39A-208ENST00000588692 C8BP07358 591 aa12.7□□□□□ -0.38
DDX39A-208ENST00000588692 PTAFRP25105 342 aa12.7□□□□□ -0.38
DDX39A-208ENST00000588692 PCGF2P35227 344 aa12.7□□□□□ -0.38
DDX39A-208ENST00000588692 RPS5P46782 204 aaKnown RBP12.7□□□□□ -0.38
DDX39A-208ENST00000588692 ARFIP2P53365 341 aa12.7□□□□□ -0.38
DDX39A-208ENST00000588692 SELPLGQ14242 412 aa12.7□□□□□ -0.38
DDX39A-208ENST00000588692 MFSD13AQ14CX5 517 aa12.7□□□□□ -0.38
DDX39A-208ENST00000588692 TRMT5Q32P41 509 aaKnown RBP12.7□□□□□ -0.38
DDX39A-208ENST00000588692 HSP90B2PQ58FF3 399 aa12.7□□□□□ -0.38
DDX39A-208ENST00000588692 CREB3L2Q70SY1 520 aa12.7□□□□□ -0.38
DDX39A-208ENST00000588692 YTHDF3Q7Z739 585 aaKnown RBP12.7□□□□□ -0.38
DDX39A-208ENST00000588692 PATL1Q86TB9 770 aaKnown RBP12.7□□□□□ -0.38
DDX39A-208ENST00000588692 BIVMQ86UB2 503 aa12.7□□□□□ -0.38
DDX39A-208ENST00000588692 OR6S1Q8NH40 331 aa12.7□□□□□ -0.38
DDX39A-208ENST00000588692 OR52N5Q8NH56 324 aa12.7□□□□□ -0.38
DDX39A-208ENST00000588692 SLC25A36Q96CQ1 311 aa12.7□□□□□ -0.38
DDX39A-208ENST00000588692 KTI12Q96EK9 354 aaPredicted RBP12.7□□□□□ -0.38
DDX39A-208ENST00000588692 SH3GL1Q99961 368 aa12.7□□□□□ -0.38
DDX39A-208ENST00000588692 FGFR1OP2Q9NVK5 253 aa12.7□□□□□ -0.38
DDX39A-208ENST00000588692 LAMP3Q9UQV4 416 aa12.7□□□□□ -0.38
DDX39A-208ENST00000588692 MAGED1Q9Y5V3 778 aaPredicted RBP12.7□□□□□ -0.38
DDX39A-208ENST00000588692 TRAV36DV7A0A075B6V5 113 aa12.69□□□□□ -0.38
DDX39A-208ENST00000588692 BBIP1A8MTZ0 92 aa12.69□□□□□ -0.38
DDX39A-208ENST00000588692 ABCD4O14678 606 aa12.69□□□□□ -0.38
DDX39A-208ENST00000588692 AIM2O14862 343 aa12.69□□□□□ -0.38
DDX39A-208ENST00000588692 FMO6PO60774 539 aa12.69□□□□□ -0.38
DDX39A-208ENST00000588692 NPPAP01160 153 aa12.69□□□□□ -0.38
DDX39A-208ENST00000588692 DANCRP0C864 163 aa12.69□□□□□ -0.38
DDX39A-208ENST00000588692 FOXG1P55316 489 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-208ENST00000588692 DMTNQ08495 405 aa12.69□□□□□ -0.38
DDX39A-208ENST00000588692 CYLC2Q14093 348 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-208ENST00000588692 MAPRE2Q15555 327 aa12.69□□□□□ -0.38
DDX39A-208ENST00000588692 INTS11Q5TA45 600 aaKnown RBP12.69□□□□□ -0.38
DDX39A-208ENST00000588692 EPHX4Q8IUS5 362 aa12.69□□□□□ -0.38
DDX39A-208ENST00000588692 ADPRHL1Q8NDY3 354 aa12.69□□□□□ -0.38
DDX39A-208ENST00000588692 SMAP2Q8WU79 429 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-208ENST00000588692 BOD1Q96IK1 185 aa12.69□□□□□ -0.38
DDX39A-208ENST00000588692 EPYCQ99645 322 aa12.69□□□□□ -0.38
DDX39A-208ENST00000588692 SLC17A5Q9NRA2 495 aa12.69□□□□□ -0.38
DDX39A-208ENST00000588692 FAIMQ9NVQ4 179 aa12.69□□□□□ -0.38
DDX39A-208ENST00000588692 RCE1Q9Y256 329 aa12.69□□□□□ -0.38
DDX39A-208ENST00000588692 B3GALT5Q9Y2C3 310 aa12.69□□□□□ -0.38
DDX39A-208ENST00000588692 IGKV1D-42A0A075B6H8 117 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 A0A087WUJ7 227 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 FAM171A2A8MVW0 826 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 SHISA9B4DS77 424 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 ZNF587BE7ETH6 402 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 FBP2O00757 339 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 KRT33AO76009 404 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 LGI1O95970 557 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 INHBBP09529 407 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 ZNF43P17038 809 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 ZNF83P51522 516 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 CDH11P55287 796 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 OR1Q1Q15612 314 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 ZNF613Q6PF04 617 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 KLHL24Q6TFL4 600 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 SMYD1Q8NB12 490 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 OR8J3Q8NGG0 315 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 RASSF5Q8WWW0 418 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 NEUROG1Q92886 237 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 TAAR8Q969N4 342 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 Q96MF0 132 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 OXGR1Q96P68 337 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 ARHGDIGQ99819 225 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 BDH2Q9BUT1 245 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 LINC00470Q9BZP3 86 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 GRIP2Q9C0E4 1043 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 CCDC134Q9H6E4 229 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 OBP2BQ9NPH6 170 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 MED4Q9NPJ6 270 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 CISD1Q9NZ45 108 aaKnown RBP12.68□□□□□ -0.38
DDX39A-208ENST00000588692 KLHL14Q9P2G3 628 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 CORINQ9Y5Q5 1042 aa12.68□□□□□ -0.38
DDX39A-208ENST00000588692 LOC102725191A0A1B0GVB3 256 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms