RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 HOXB9P17482 250 aaPredicted RBP12.53□□□□□ -0.4
VMP1-206ENST00000587945 RPS5P46782 204 aaKnown RBP12.53□□□□□ -0.4
VMP1-206ENST00000587945 TUBA1BP68363 451 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 TUBA4AP68366 448 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 EGR4Q05215 589 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 ZSWIM7Q19AV6 140 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 ZNF544Q6NX49 715 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 NIPAL3Q6P499 406 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 KLHL24Q6TFL4 600 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 CLEC2AQ6UVW9 174 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 TUBA1AQ71U36 451 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 COMTD1Q86VU5 262 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 FUNDC1Q8IVP5 155 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 MSRB3Q8IXL7 192 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 ZNF525Q8N782 197 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 OR10H5Q8NGA6 315 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 STK35Q8TDR2 534 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 KTI12Q96EK9 354 aaPredicted RBP12.53□□□□□ -0.4
VMP1-206ENST00000587945 ALKBH3Q96Q83 286 aaPredicted RBP12.53□□□□□ -0.4
VMP1-206ENST00000587945 EBF4Q9BQW3 602 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 PTDSS2Q9BVG9 487 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 PRR14Q9BWN1 585 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 ARMC7Q9H6L4 198 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 BCL2L10Q9HD36 194 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 SLCO1B3Q9NPD5 702 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 SLC25A37Q9NYZ2 338 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 ALPK2Q86TB3 2170 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 A0A096LNT2 108 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 A0A096LPE4 126 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 A0A096LPI6 279 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 A0A1W2PPZ6 126 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 C5orf58C9J3I9 102 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 FTCDNL1E5RQL4 147 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 ZNF587BE7ETH6 402 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 NR5A2O00482 541 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 ERLIN1O75477 346 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 LY6HO94772 140 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 VAMP5O95183 116 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 WNT11O96014 354 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 PNMTP11086 282 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 BMP2P12643 396 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 IDH3AP50213 366 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 STX1BP61266 288 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 TBRG1Q3YBR2 411 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 PAGE3Q5JUK9 113 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 GOLGA6L1Q8N7Z2 621 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 OR1K1Q8NGR3 316 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 MFSD8Q8NHS3 518 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 NFKBIDQ8NI38 313 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 BBS10Q8TAM1 723 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 PIF1Q9H611 641 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 TCF7L2Q9NQB0 619 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 TMEM45AQ9NWC5 275 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 PRDM4Q9UKN5 801 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 RASD1Q9Y272 281 aa12.52□□□□□ -0.41
VMP1-206ENST00000587945 IGHV1-18A0A0C4DH31 117 aa12.51□□□□□ -0.41
VMP1-206ENST00000587945 ELOA3DA6NLF2 546 aaPredicted RBP12.51□□□□□ -0.41
VMP1-206ENST00000587945 H7C417 338 aa12.51□□□□□ -0.41
VMP1-206ENST00000587945 POLR3GO15318 223 aaPredicted RBP12.51□□□□□ -0.41
VMP1-206ENST00000587945 TLX2O43763 284 aaPredicted RBP12.51□□□□□ -0.41
VMP1-206ENST00000587945 CBLP22681 906 aa12.51□□□□□ -0.41
VMP1-206ENST00000587945 HTR2AP28223 471 aa12.51□□□□□ -0.41
VMP1-206ENST00000587945 APOBEC3AP31941 199 aaPredicted RBP12.51□□□□□ -0.41
VMP1-206ENST00000587945 CLDN17P56750 224 aa12.51□□□□□ -0.41
VMP1-206ENST00000587945 FADDQ13158 208 aa12.51□□□□□ -0.41
VMP1-206ENST00000587945 MST1LQ2TV78 715 aa12.51□□□□□ -0.41
VMP1-206ENST00000587945 ELOA3BQ3SY89 546 aa12.51□□□□□ -0.41
VMP1-206ENST00000587945 GLIPR1L2Q4G1C9 344 aa12.51□□□□□ -0.41
VMP1-206ENST00000587945 GCNT6Q5T4J0 391 aa12.51□□□□□ -0.41
VMP1-206ENST00000587945 BLOC1S3Q6QNY0 202 aa12.51□□□□□ -0.41
VMP1-206ENST00000587945 ABHD12BQ7Z5M8 362 aaPredicted RBP12.51□□□□□ -0.41
VMP1-206ENST00000587945 ELOA3Q8NG57 546 aa12.51□□□□□ -0.41
VMP1-206ENST00000587945 NANOS1Q8WY41 292 aaKnown RBP12.51□□□□□ -0.41
VMP1-206ENST00000587945 BCL2L2Q92843 193 aaPredicted RBP12.51□□□□□ -0.41
VMP1-206ENST00000587945 SPDL1Q96EA4 605 aa12.51□□□□□ -0.41
VMP1-206ENST00000587945 FBXO17Q96EF6 278 aa12.51□□□□□ -0.41
VMP1-206ENST00000587945 C7orf26Q96N11 449 aa12.51□□□□□ -0.41
VMP1-206ENST00000587945 RAD21L1Q9H4I0 556 aa12.51□□□□□ -0.41
VMP1-206ENST00000587945 CCDC167Q9P0B6 97 aa12.51□□□□□ -0.41
VMP1-206ENST00000587945 A0A1B0GWA3 101 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 TPST1O60507 370 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 ARAFP10398 606 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 ETS2P15036 469 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 GTF2E2P29084 291 aaKnown RBP12.5□□□□□ -0.41
VMP1-206ENST00000587945 PRKAR1BP31321 381 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 MRPL19P49406 292 aaKnown RBP12.5□□□□□ -0.41
VMP1-206ENST00000587945 DSCR9P59020 149 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 UBE2NP61088 152 aaKnown RBP12.5□□□□□ -0.41
VMP1-206ENST00000587945 CDK6Q00534 326 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 ROR2Q01974 943 aaKnown RBP12.5□□□□□ -0.41
VMP1-206ENST00000587945 CHRNB3Q05901 458 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 LRIF1Q5T3J3 769 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 AGBL2Q5U5Z8 902 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 LRRC8CQ8TDW0 803 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 TAAR8Q969N4 342 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 SLC35B4Q969S0 331 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 BOD1Q96IK1 185 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 SLC38A2Q96QD8 506 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 NELFAQ9H3P2 528 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 IKZF5Q9H5V7 419 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms