RNA–Protein interactions for RNA: ENST00000586568.1

CXXC1-206, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-206ENST00000586568 LINGO2Q7L985 606 aa12.78□□□□□ -0.36
CXXC1-206ENST00000586568 SPATA19Q7Z5L4 167 aa12.78□□□□□ -0.36
CXXC1-206ENST00000586568 VRK2Q86Y07 508 aa12.78□□□□□ -0.36
CXXC1-206ENST00000586568 EPHX4Q8IUS5 362 aa12.78□□□□□ -0.36
CXXC1-206ENST00000586568 CLIP4Q8N3C7 705 aa12.78□□□□□ -0.36
CXXC1-206ENST00000586568 ANKS4BQ8N8V4 417 aa12.78□□□□□ -0.36
CXXC1-206ENST00000586568 ZNF540Q8NDQ6 660 aa12.78□□□□□ -0.36
CXXC1-206ENST00000586568 OR52P1PQ8NH57 321 aa12.78□□□□□ -0.36
CXXC1-206ENST00000586568 PNPT1Q8TCS8 783 aaKnown RBP12.78□□□□□ -0.36
CXXC1-206ENST00000586568 MAGEE2Q8TD90 523 aaPredicted RBP12.78□□□□□ -0.36
CXXC1-206ENST00000586568 VRK1Q99986 396 aaPredicted RBP12.78□□□□□ -0.36
CXXC1-206ENST00000586568 C19orf24Q9BVV8 132 aa12.78□□□□□ -0.36
CXXC1-206ENST00000586568 TAPBPLQ9BX59 468 aa12.78□□□□□ -0.36
CXXC1-206ENST00000586568 PLK3Q9H4B4 646 aa12.78□□□□□ -0.36
CXXC1-206ENST00000586568 MYOZ1Q9NP98 299 aaPredicted RBP12.78□□□□□ -0.36
CXXC1-206ENST00000586568 ADPRHL2Q9NX46 363 aa12.78□□□□□ -0.36
CXXC1-206ENST00000586568 DSPPQ9NZW4 1301 aa12.78□□□□□ -0.36
CXXC1-206ENST00000586568 ZNF587BE7ETH6 402 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 NR5A2O00482 541 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 SDHDO14521 159 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 PDE5AO76074 875 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 KRT75O95678 551 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 IGLV1-44P01699 117 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 ZNF23P17027 643 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 BGNP21810 368 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 UBE2NP61088 152 aaKnown RBP12.77□□□□□ -0.37
CXXC1-206ENST00000586568 COPZ1P61923 177 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 NAAAQ02083 359 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 STX3Q13277 289 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 ZSWIM7Q19AV6 140 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 LIN52Q52LA3 116 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 C1orf140Q5VVS0 124 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 ZNF836Q6ZNA1 936 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 SLC46A3Q7Z3Q1 461 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 CADM2Q8N3J6 435 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 ANKK1Q8NFD2 765 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 KCNS3Q9BQ31 491 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 PARD6BQ9BYG5 372 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 CHODLQ9H9P2 273 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 SLC6A13Q9NSD5 602 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 RASD1Q9Y272 281 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 CHST2Q9Y4C5 530 aa12.77□□□□□ -0.37
CXXC1-206ENST00000586568 TMEM229AB2RXF0 380 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 RFXANKO14593 260 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 RGS16O15492 202 aaPredicted RBP12.76□□□□□ -0.37
CXXC1-206ENST00000586568 FRS3O43559 492 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 UPK3AO75631 287 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 TGFAP01135 160 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 CECR9P0C854 216 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 IDH3GP51553 393 aaPredicted RBP12.76□□□□□ -0.37
CXXC1-206ENST00000586568 SRSF2Q01130 221 aaKnown RBP12.76□□□□□ -0.37
CXXC1-206ENST00000586568 HGFACQ04756 655 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 CARTPTQ16568 116 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 KRT71Q3SY84 523 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 IQCCQ4KMZ1 466 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 IL17RELQ6ZVW7 336 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 GLB1L3Q8NCI6 653 aaPredicted RBP12.76□□□□□ -0.37
CXXC1-206ENST00000586568 OR4F15Q8NGB8 312 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 MFSD8Q8NHS3 518 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 STK35Q8TDR2 534 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 SLC38A5Q8WUX1 472 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 C3orf49Q96BT1 292 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 LINC00470Q9BZP3 86 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 NELFAQ9H3P2 528 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 MOV10Q9HCE1 1003 aaKnown RBP12.76□□□□□ -0.37
CXXC1-206ENST00000586568 CALML5Q9NZT1 146 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 FBXO9Q9UK97 447 aaPredicted RBP12.76□□□□□ -0.37
CXXC1-206ENST00000586568 RAB21Q9UL25 225 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 ZNF232Q9UNY5 417 aa12.76□□□□□ -0.37
CXXC1-206ENST00000586568 A0A096LPE4 126 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 A0A096LPI6 279 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 A0A1W2PPZ6 126 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 FTCDNL1E5RQL4 147 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 RPL36A-HNRNPH2H7BZ11 118 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 ZNF432O94892 652 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 IGKV3-15P01624 115 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 IL6P05231 212 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 ZCCHC18P0CG32 403 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 ETFAP13804 333 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 CBR1P16152 277 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 HNF1AP20823 631 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 GIFP27352 417 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 EPHA3P29320 983 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 CALCRP30988 508 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 PPOXP50336 477 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 CRISP3P54108 245 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 SH3BGRP55822 239 aaPredicted RBP12.75□□□□□ -0.37
CXXC1-206ENST00000586568 TUBA1BP68363 451 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 TUBA4AP68366 448 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 ARF1P84077 181 aaKnown RBP12.75□□□□□ -0.37
CXXC1-206ENST00000586568 BST1Q10588 318 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 LARS2Q15031 903 aaKnown RBP12.75□□□□□ -0.37
CXXC1-206ENST00000586568 TNFAIP8L3Q5GJ75 292 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 RNF220Q5VTB9 566 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 PRAMEF8Q5VWM4 474 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 PRAMEF7Q5VXH5 474 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 NIPAL3Q6P499 406 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 TUBA1AQ71U36 451 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 NUP37Q8NFH4 326 aa12.75□□□□□ -0.37
CXXC1-206ENST00000586568 ALKBH3Q96Q83 286 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms