RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 PUDPQ08623 228 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 Q0VFX4 171 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 RAB40BQ12829 278 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 CLN3Q13286 438 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 ITGADQ13349 1161 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 TMED1Q13445 227 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 KRR1Q13601 381 aaKnown RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 TUBA3CQ13748 450 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 APOFQ13790 326 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 OR7A5Q15622 319 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 TOMM34Q15785 309 aaPredicted RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 TBCEQ15813 527 aaPredicted RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 CTU2Q2VPK5 515 aaKnown RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 KLHL12Q53G59 568 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 SLC25A53Q5H9E4 307 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 TMEM201Q5SNT2 666 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 SLC6A19Q695T7 634 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 TIGD3Q6B0B8 471 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 TUBA3EQ6PEY2 450 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 ARSKQ6UWY0 536 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 KCTD8Q6ZWB6 473 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 CHMP1BQ7LBR1 199 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 SLC22A16Q86VW1 577 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 MEX3DQ86XN8 651 aaKnown RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 KIF18BQ86Y91 864 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 MARCH9Q86YJ5 346 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 UEVLDQ8IX04 471 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 GTPBP8Q8N3Z3 284 aaPredicted RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 FAM26EQ8N5C1 309 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 LSM14AQ8ND56 463 aaKnown RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 OR8D4Q8NGM9 314 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 MOSPD2Q8NHP6 518 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 MFSD8Q8NHS3 518 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 RHOXF1Q8NHV9 184 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 FBLIM1Q8WUP2 373 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 LIPHQ8WWY8 451 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 PNPLA2Q96AD5 504 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 KTI12Q96EK9 354 aaPredicted RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 CRELD1Q96HD1 420 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 TMEM80Q96HE8 168 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 SFXN2Q96NB2 322 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 FRMD6Q96NE9 622 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 OR5B2Q96R09 309 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 GPX7Q96SL4 187 aaPredicted RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 TUBA1CQ9BQE3 449 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 KATNB1Q9BVA0 655 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 MND1Q9BWT6 205 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 POTEKPQ9BYX7 375 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 MCCC2Q9HCC0 563 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 ZFP64Q9NPA5 681 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 CHST11Q9NPF2 352 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 KLHL1Q9NR64 748 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 MRPL39Q9NYK5 338 aaKnown RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 IL20RAQ9UHF4 553 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 KLK13Q9UKR3 277 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 RPH3AQ9Y2J0 694 aaPredicted RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 GPR52Q9Y2T5 361 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 EXOSC1Q9Y3B2 195 aaKnown RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 TTC28Q96AY4 2481 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 VCANP13611 3396 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 ARHGAP21Q5T5U3 1957 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 IGKV1D-42A0A075B6H8 117 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 TEX13CA0A0J9YWL9 993 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 ZNF99A8MXY4 864 aaPredicted RBP5.59□□□□□ -1.51
LIG3-206ENST00000586058 KDM4EB2RXH2 506 aaPredicted RBP5.59□□□□□ -1.51
LIG3-206ENST00000586058 NPIPA2E9PIF3 369 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 NPIPA3F8WFD2 350 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 G3V3Y1 287 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 M0R082 166 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 M0R129 80 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 ETV2O00321 342 aaPredicted RBP5.59□□□□□ -1.51
LIG3-206ENST00000586058 BHLHE40O14503 412 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 ARPC3O15145 178 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 DNPH1O43598 174 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 TLX3O43711 291 aaPredicted RBP5.59□□□□□ -1.51
LIG3-206ENST00000586058 PRKYO43930 277 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 NME2P1O60361 137 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 ENTPD6O75354 484 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 WBP4O75554 376 aaKnown RBP5.59□□□□□ -1.51
LIG3-206ENST00000586058 VAMP5O95183 116 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 PMS2P2O95744 297 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 WDPCPO95876 746 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 F10P00742 488 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 BGLAPP02818 100 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 TP53P04637 393 aaPredicted RBP5.59□□□□□ -1.51
LIG3-206ENST00000586058 CDK1P06493 297 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 CD14P08571 375 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 ASAH2BP0C7U1 165 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 SMIM18P0DKX4 95 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 POU3F2P20265 443 aaPredicted RBP5.59□□□□□ -1.51
LIG3-206ENST00000586058 NME2P22392 152 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 MST1P26927 711 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 DCKP27707 260 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 PSMB9P28065 219 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 GRPRP30550 384 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 UQCRC1P31930 480 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 SFTPDP35247 375 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 CD96P40200 585 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 AQP2P41181 271 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 CCL11P51671 97 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms