RNA–Protein interactions for RNA: ENST00000585913.5

CIRBP-205, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-205ENST00000585913 ABHD12BQ7Z5M8 362 aaPredicted RBP19.03■□□□□ 0.64
CIRBP-205ENST00000585913 COMTD1Q86VU5 262 aa19.03■□□□□ 0.64
CIRBP-205ENST00000585913 ARMC8Q8IUR7 673 aa19.03■□□□□ 0.64
CIRBP-205ENST00000585913 PIAS4Q8N2W9 510 aaPredicted RBP19.03■□□□□ 0.64
CIRBP-205ENST00000585913 C17orf78Q8N4C9 275 aa19.03■□□□□ 0.64
CIRBP-205ENST00000585913 DPP10Q8N608 796 aa19.03■□□□□ 0.64
CIRBP-205ENST00000585913 C11orf65Q8NCR3 313 aa19.03■□□□□ 0.64
CIRBP-205ENST00000585913 TSPEARQ8WU66 669 aa19.03■□□□□ 0.64
CIRBP-205ENST00000585913 DNAJA4Q8WW22 397 aaPredicted RBP19.03■□□□□ 0.64
CIRBP-205ENST00000585913 GTPBP3Q969Y2 492 aaKnown RBP19.03■□□□□ 0.64
CIRBP-205ENST00000585913 RADILQ96JH8 1075 aa19.03■□□□□ 0.64
CIRBP-205ENST00000585913 ANKRD27Q96NW4 1050 aa19.03■□□□□ 0.64
CIRBP-205ENST00000585913 CGREF1Q99674 301 aa19.03■□□□□ 0.64
CIRBP-205ENST00000585913 RSPO3Q9BXY4 272 aaPredicted RBP19.03■□□□□ 0.64
CIRBP-205ENST00000585913 AMBRA1Q9C0C7 1298 aa19.03■□□□□ 0.64
CIRBP-205ENST00000585913 CISD1Q9NZ45 108 aaKnown RBP19.03■□□□□ 0.64
CIRBP-205ENST00000585913 SELENONQ9NZV5 590 aa19.03■□□□□ 0.64
CIRBP-205ENST00000585913 FAM171A2A8MVW0 826 aa19.02■□□□□ 0.64
CIRBP-205ENST00000585913 SHISA9B4DS77 424 aa19.02■□□□□ 0.64
CIRBP-205ENST00000585913 FTCDNL1E5RQL4 147 aa19.02■□□□□ 0.64
CIRBP-205ENST00000585913 DANCRP0C864 163 aa19.02■□□□□ 0.64
CIRBP-205ENST00000585913 PNMTP11086 282 aa19.02■□□□□ 0.64
CIRBP-205ENST00000585913 PTAFRP25105 342 aa19.02■□□□□ 0.64
CIRBP-205ENST00000585913 HTR2AP28223 471 aa19.02■□□□□ 0.64
CIRBP-205ENST00000585913 NFYCQ13952 458 aa19.02■□□□□ 0.64
CIRBP-205ENST00000585913 METTL21CQ5VZV1 264 aa19.02■□□□□ 0.64
CIRBP-205ENST00000585913 CREB3L2Q70SY1 520 aa19.02■□□□□ 0.64
CIRBP-205ENST00000585913 RETREG3Q86VR2 466 aa19.02■□□□□ 0.64
CIRBP-205ENST00000585913 RNF217Q8TC41 542 aa19.02■□□□□ 0.64
CIRBP-205ENST00000585913 SLC38A4Q969I6 547 aa19.02■□□□□ 0.64
CIRBP-205ENST00000585913 KTI12Q96EK9 354 aaPredicted RBP19.02■□□□□ 0.64
CIRBP-205ENST00000585913 TRMT61AQ96FX7 289 aaKnown RBP19.02■□□□□ 0.64
CIRBP-205ENST00000585913 COX4I2Q96KJ9 171 aa19.02■□□□□ 0.64
CIRBP-205ENST00000585913 PTDSS2Q9BVG9 487 aa19.02■□□□□ 0.64
CIRBP-205ENST00000585913 ALG2Q9H553 416 aa19.02■□□□□ 0.64
CIRBP-205ENST00000585913 FAIMQ9NVQ4 179 aa19.02■□□□□ 0.64
CIRBP-205ENST00000585913 AMDHD2Q9Y303 409 aa19.02■□□□□ 0.64
CIRBP-205ENST00000585913 MAGED1Q9Y5V3 778 aaPredicted RBP19.02■□□□□ 0.64
CIRBP-205ENST00000585913 TRIM64A6NGJ6 449 aa19.01■□□□□ 0.63
CIRBP-205ENST00000585913 TRIM64BA6NI03 449 aa19.01■□□□□ 0.63
CIRBP-205ENST00000585913 M0R1B8 84 aa19.01■□□□□ 0.63
CIRBP-205ENST00000585913 OR2T1O43869 369 aa19.01■□□□□ 0.63
CIRBP-205ENST00000585913 MTPNP58546 118 aa19.01■□□□□ 0.63
CIRBP-205ENST00000585913 RBBP4Q09028 425 aa19.01■□□□□ 0.63
CIRBP-205ENST00000585913 FAM91A1Q658Y4 838 aa19.01■□□□□ 0.63
CIRBP-205ENST00000585913 ULK3Q6PHR2 472 aa19.01■□□□□ 0.63
CIRBP-205ENST00000585913 KLHL24Q6TFL4 600 aa19.01■□□□□ 0.63
CIRBP-205ENST00000585913 CLEC9AQ6UXN8 241 aa19.01■□□□□ 0.63
CIRBP-205ENST00000585913 CIARTQ8N365 385 aaPredicted RBP19.01■□□□□ 0.63
CIRBP-205ENST00000585913 TMEM120AQ9BXJ8 343 aa19.01■□□□□ 0.63
CIRBP-205ENST00000585913 EVA1AQ9H8M9 152 aa19.01■□□□□ 0.63
CIRBP-205ENST00000585913 TMEM27Q9HBJ8 222 aa19.01■□□□□ 0.63
CIRBP-205ENST00000585913 SLC17A5Q9NRA2 495 aa19.01■□□□□ 0.63
CIRBP-205ENST00000585913 POU2F3Q9UKI9 436 aa19.01■□□□□ 0.63
CIRBP-205ENST00000585913 OVOL3O00110 214 aa19■□□□□ 0.63
CIRBP-205ENST00000585913 TROVE2P10155 538 aaKnown RBP eCLIP19■□□□□ 0.63
CIRBP-205ENST00000585913 HOXB4P17483 251 aaPredicted RBP19■□□□□ 0.63
CIRBP-205ENST00000585913 CDH2P19022 906 aaPredicted RBP19■□□□□ 0.63
CIRBP-205ENST00000585913 CD40P25942 277 aa19■□□□□ 0.63
CIRBP-205ENST00000585913 SELENOPP49908 381 aa19■□□□□ 0.63
CIRBP-205ENST00000585913 PGGHGQ32M88 737 aa19■□□□□ 0.63
CIRBP-205ENST00000585913 FAM69AQ5T7M9 428 aa19■□□□□ 0.63
CIRBP-205ENST00000585913 NIPAL3Q6P499 406 aa19■□□□□ 0.63
CIRBP-205ENST00000585913 SLC22A25Q6T423 547 aa19■□□□□ 0.63
CIRBP-205ENST00000585913 RANBP3LQ86VV4 465 aaPredicted RBP19■□□□□ 0.63
CIRBP-205ENST00000585913 PTOV1Q86YD1 416 aa19■□□□□ 0.63
CIRBP-205ENST00000585913 DEPDC4Q8N2C3 294 aa19■□□□□ 0.63
CIRBP-205ENST00000585913 WDR31Q8NA23 367 aa19■□□□□ 0.63
CIRBP-205ENST00000585913 SMYD1Q8NB12 490 aa19■□□□□ 0.63
CIRBP-205ENST00000585913 SLC47A1Q96FL8 570 aa19■□□□□ 0.63
CIRBP-205ENST00000585913 PRR14Q9BWN1 585 aa19■□□□□ 0.63
CIRBP-205ENST00000585913 C1QTNF6Q9BXI9 259 aa19■□□□□ 0.63
CIRBP-205ENST00000585913 TRAV36DV7A0A075B6V5 113 aa18.99■□□□□ 0.63
CIRBP-205ENST00000585913 OR6C65A6NJZ3 312 aa18.99■□□□□ 0.63
CIRBP-205ENST00000585913 ZNF587BE7ETH6 402 aa18.99■□□□□ 0.63
CIRBP-205ENST00000585913 AIM2O14862 343 aa18.99■□□□□ 0.63
CIRBP-205ENST00000585913 SMAD7O15105 426 aaKnown RBP18.99■□□□□ 0.63
CIRBP-205ENST00000585913 MFN2O95140 757 aa18.99■□□□□ 0.63
CIRBP-205ENST00000585913 ZNF43P17038 809 aa18.99■□□□□ 0.63
CIRBP-205ENST00000585913 CDKN1AP38936 164 aa18.99■□□□□ 0.63
CIRBP-205ENST00000585913 DMTNQ08495 405 aa18.99■□□□□ 0.63
CIRBP-205ENST00000585913 SPOCK1Q08629 439 aa18.99■□□□□ 0.63
CIRBP-205ENST00000585913 SELPLGQ14242 412 aa18.99■□□□□ 0.63
CIRBP-205ENST00000585913 OR1Q1Q15612 314 aa18.99■□□□□ 0.63
CIRBP-205ENST00000585913 C1QTNF12Q5T7M4 302 aa18.99■□□□□ 0.63
CIRBP-205ENST00000585913 Q71RC1 249 aaPredicted RBP18.99■□□□□ 0.63
CIRBP-205ENST00000585913 EPHX4Q8IUS5 362 aa18.99■□□□□ 0.63
CIRBP-205ENST00000585913 KDM8Q8N371 416 aa18.99■□□□□ 0.63
CIRBP-205ENST00000585913 TAAR8Q969N4 342 aa18.99■□□□□ 0.63
CIRBP-205ENST00000585913 ALKBH3Q96Q83 286 aaPredicted RBP18.99■□□□□ 0.63
CIRBP-205ENST00000585913 TRAF4Q9BUZ4 470 aaPredicted RBP18.99■□□□□ 0.63
CIRBP-205ENST00000585913 M0R082 166 aa18.98■□□□□ 0.63
CIRBP-205ENST00000585913 WNT11O96014 354 aa18.98■□□□□ 0.63
CIRBP-205ENST00000585913 PCBP3P57721 371 aaKnown RBP18.98■□□□□ 0.63
CIRBP-205ENST00000585913 PRPS1P60891 318 aa18.98■□□□□ 0.63
CIRBP-205ENST00000585913 IL1RL1Q01638 556 aa18.98■□□□□ 0.63
CIRBP-205ENST00000585913 AGAP6Q5VW22 663 aa18.98■□□□□ 0.63
CIRBP-205ENST00000585913 NET1Q7Z628 596 aaPredicted RBP18.98■□□□□ 0.63
CIRBP-205ENST00000585913 SLC30A8Q8IWU4 369 aa18.98■□□□□ 0.63
CIRBP-205ENST00000585913 ZNF417Q8TAU3 575 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms