RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 QPCTLQ9NXS2 382 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 UBAP1Q9NZ09 502 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 CNOT2Q9NZN8 540 aaKnown RBP11.41□□□□□ -0.58
VMP1-202ENST00000585847 MED11Q9P086 117 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 CHRNA9Q9UGM1 479 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 OSGIN1Q9UJX0 560 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 HIF3AQ9Y2N7 669 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 DNAJC13O75165 2243 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 IMPA2O14732 288 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 ARPC3O15145 178 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 SEC14L5O43304 696 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 DNPH1O43598 174 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 NPIPB7O75200 414 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 OR7A10O76100 309 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 IFNGP01579 166 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 RPSAP08865 295 aaKnown RBP11.4□□□□□ -0.58
VMP1-202ENST00000585847 CELA3AP09093 270 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 POU2F1P14859 743 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 TTKP33981 857 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 MAGEA5P43359 124 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 MASP1P48740 699 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 TDGF1P3P51864 188 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 MVKQ03426 396 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 CD47Q08722 323 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 BLMHQ13867 455 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 ZNF74Q16587 644 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 OCLNQ16625 522 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 PGGHGQ32M88 737 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 PLPPR5Q32ZL2 321 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 EMC4Q5J8M3 183 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 WDR88Q6ZMY6 472 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 MAMDC2Q7Z304 686 aaPredicted RBP11.4□□□□□ -0.58
VMP1-202ENST00000585847 ATCAYQ86WG3 371 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 LNX2Q8N448 690 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 FAM26EQ8N5C1 309 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 ADPRHL1Q8NDY3 354 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 OR1J4Q8NGS1 313 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 PLEKHA8Q96JA3 519 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 DSN1Q9H410 356 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 ZDHHC11Q9H8X9 412 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 MEPEQ9NQ76 525 aaPredicted RBP11.4□□□□□ -0.58
VMP1-202ENST00000585847 ASF1BQ9NVP2 202 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 CLN6Q9NWW5 311 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 NDUFA13Q9P0J0 144 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 SIGLEC7Q9Y286 467 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 HDGFL3Q9Y3E1 203 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 LIPGQ9Y5X9 500 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 TEX15Q9BXT5 2789 aa11.4□□□□□ -0.58
VMP1-202ENST00000585847 ZGRF1Q86YA3 2104 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 TMED7-TICAM2A0A0A6YYA0 188 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 EFCAB10A6NFE3 127 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 FAM166BA8MTA8 275 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 SUSD5O60279 629 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 ZIC3O60481 467 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 HIST1H2ABP04908 130 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 PIPP12273 146 aaPredicted RBP11.39□□□□□ -0.59
VMP1-202ENST00000585847 CRHBPP24387 322 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 POU1F1P28069 291 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 SRD5A2P31213 254 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 GPR4P46093 362 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 MLLT10P55197 1068 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 MYBPC1Q00872 1141 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 GINS1Q14691 196 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 C4orf17Q53FE4 359 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 FAM205BPQ63HN1 556 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 GPR139Q6DWJ6 353 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 DPY19L2P2Q6ZN68 376 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 PTCHD4Q6ZW05 846 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 HIST3H2AQ7L7L0 130 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 HDDC2Q7Z4H3 204 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 GID4Q8IVV7 300 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 ENTHD1Q8IYW4 607 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 FAM98AQ8NCA5 519 aaKnown RBP11.39□□□□□ -0.59
VMP1-202ENST00000585847 MFSD8Q8NHS3 518 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 FAR1Q8WVX9 515 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 HIST1H2ACQ93077 130 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 JSRP1Q96MG2 331 aaPredicted RBP11.39□□□□□ -0.59
VMP1-202ENST00000585847 MYCBPQ99417 103 aaPredicted RBP11.39□□□□□ -0.59
VMP1-202ENST00000585847 PIGQQ9BRB3 760 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 PRR14Q9BWN1 585 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 ASPNQ9BXN1 380 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 OR52D1Q9H346 318 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 NANSQ9NR45 359 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.39□□□□□ -0.59
VMP1-202ENST00000585847 TMED7Q9Y3B3 224 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 GTF3C1Q12789 2109 aa11.39□□□□□ -0.59
VMP1-202ENST00000585847 UTP20O75691 2785 aaKnown RBP11.39□□□□□ -0.59
VMP1-202ENST00000585847 SVILO95425 2214 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 IGKV1D-42A0A075B6H8 117 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 TRIM64CA6NLI5 447 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 SLC1A7O00341 560 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 CLPTM1O96005 669 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 TP53P04637 393 aaPredicted RBP11.38□□□□□ -0.59
VMP1-202ENST00000585847 TSPAN19P0C672 248 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 PEPDP12955 493 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 PAICSP22234 425 aaKnown RBP11.38□□□□□ -0.59
VMP1-202ENST00000585847 GTF2E2P29084 291 aaKnown RBP11.38□□□□□ -0.59
VMP1-202ENST00000585847 CENPAP49450 140 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 NR1H2P55055 460 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 B3GALT5-AS1P59052 145 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms