RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 EMC3Q9P0I2 261 aa20.59■□□□□ 0.89
LSM7-202ENST00000585395 RIMS3Q9UJD0 308 aa20.59■□□□□ 0.89
LSM7-202ENST00000585395 PROCRQ9UNN8 238 aa20.59■□□□□ 0.89
LSM7-202ENST00000585395 ACANP16112 2415 aa20.59■□□□□ 0.89
LSM7-202ENST00000585395 ZC3H12DA2A288 527 aaKnown RBP20.58■□□□□ 0.89
LSM7-202ENST00000585395 LIPT2A6NK58 231 aa20.58■□□□□ 0.89
LSM7-202ENST00000585395 MSTNO14793 375 aa20.58■□□□□ 0.89
LSM7-202ENST00000585395 NPIPB7O75200 414 aa20.58■□□□□ 0.89
LSM7-202ENST00000585395 TNFSF13O75888 250 aa20.58■□□□□ 0.89
LSM7-202ENST00000585395 AQP8O94778 261 aa20.58■□□□□ 0.89
LSM7-202ENST00000585395 FPR1P21462 350 aa20.58■□□□□ 0.89
LSM7-202ENST00000585395 RBM34P42696 430 aaKnown RBP20.58■□□□□ 0.89
LSM7-202ENST00000585395 SORDQ00796 357 aa20.58■□□□□ 0.89
LSM7-202ENST00000585395 OR7A5Q15622 319 aa20.58■□□□□ 0.89
LSM7-202ENST00000585395 FAM69AQ5T7M9 428 aa20.58■□□□□ 0.89
LSM7-202ENST00000585395 LCN8Q6JVE9 175 aa20.58■□□□□ 0.89
LSM7-202ENST00000585395 PAQR6Q6TCH4 344 aa20.58■□□□□ 0.89
LSM7-202ENST00000585395 FAM214BQ7L5A3 538 aa20.58■□□□□ 0.89
LSM7-202ENST00000585395 CCDC124Q96CT7 223 aaKnown RBP20.58■□□□□ 0.89
LSM7-202ENST00000585395 KLHL4Q9C0H6 718 aa20.58■□□□□ 0.89
LSM7-202ENST00000585395 JKAMPQ9P055 326 aa20.58■□□□□ 0.89
LSM7-202ENST00000585395 C6orf203Q9P0P8 240 aaPredicted RBP20.58■□□□□ 0.89
LSM7-202ENST00000585395 ENPP4Q9Y6X5 453 aa20.58■□□□□ 0.89
LSM7-202ENST00000585395 HTR3EA5X5Y0 456 aa20.57■□□□□ 0.88
LSM7-202ENST00000585395 GPR171O14626 319 aa20.57■□□□□ 0.88
LSM7-202ENST00000585395 CYTIPO60759 359 aa20.57■□□□□ 0.88
LSM7-202ENST00000585395 SS18L1O75177 396 aaPredicted RBP20.57■□□□□ 0.88
LSM7-202ENST00000585395 VAMP5O95183 116 aa20.57■□□□□ 0.88
LSM7-202ENST00000585395 IMPDH2P12268 514 aa20.57■□□□□ 0.88
LSM7-202ENST00000585395 HOXB6P17509 224 aaKnown RBP20.57■□□□□ 0.88
LSM7-202ENST00000585395 RASGEF1BQ0VAM2 473 aa20.57■□□□□ 0.88
LSM7-202ENST00000585395 PDK3Q15120 406 aa20.57■□□□□ 0.88
LSM7-202ENST00000585395 TGIF2LYQ8IUE0 185 aa20.57■□□□□ 0.88
LSM7-202ENST00000585395 OFCC1Q8IZS5 231 aa20.57■□□□□ 0.88
LSM7-202ENST00000585395 OR6K3Q8NGY3 331 aa20.57■□□□□ 0.88
LSM7-202ENST00000585395 FAM222BQ8WU58 562 aa20.57■□□□□ 0.88
LSM7-202ENST00000585395 AMBRA1Q9C0C7 1298 aa20.57■□□□□ 0.88
LSM7-202ENST00000585395 FANCFQ9NPI8 374 aa20.57■□□□□ 0.88
LSM7-202ENST00000585395 CLEC4AQ9UMR7 237 aa20.57■□□□□ 0.88
LSM7-202ENST00000585395 CORINQ9Y5Q5 1042 aa20.57■□□□□ 0.88
LSM7-202ENST00000585395 ZNF469Q96JG9 3925 aaPredicted RBP20.56■□□□□ 0.88
LSM7-202ENST00000585395 SMAD9O15198 467 aaKnown RBP20.56■□□□□ 0.88
LSM7-202ENST00000585395 RPS5P46782 204 aaKnown RBP20.56■□□□□ 0.88
LSM7-202ENST00000585395 PIN1Q13526 163 aaPredicted RBP20.56■□□□□ 0.88
LSM7-202ENST00000585395 TRAM2Q15035 370 aa20.56■□□□□ 0.88
LSM7-202ENST00000585395 CYP2R1Q6VVX0 501 aa20.56■□□□□ 0.88
LSM7-202ENST00000585395 LINC00114Q6XXX2 140 aa20.56■□□□□ 0.88
LSM7-202ENST00000585395 BTLAQ7Z6A9 289 aa20.56■□□□□ 0.88
LSM7-202ENST00000585395 C10orf53Q8N6V4 93 aa20.56■□□□□ 0.88
LSM7-202ENST00000585395 LINC01560Q8TB33 94 aa20.56■□□□□ 0.88
LSM7-202ENST00000585395 SLC25A36Q96CQ1 311 aa20.56■□□□□ 0.88
LSM7-202ENST00000585395 STARD4Q96DR4 205 aa20.56■□□□□ 0.88
LSM7-202ENST00000585395 ASPNQ9BXN1 380 aa20.56■□□□□ 0.88
LSM7-202ENST00000585395 OPN3Q9H1Y3 402 aaPredicted RBP20.56■□□□□ 0.88
LSM7-202ENST00000585395 CXXC4Q9H2H0 198 aa20.56■□□□□ 0.88
LSM7-202ENST00000585395 KLHL13Q9P2N7 655 aa20.56■□□□□ 0.88
LSM7-202ENST00000585395 A8MXE2 369 aa20.55■□□□□ 0.88
LSM7-202ENST00000585395 GSC2O15499 205 aa20.55■□□□□ 0.88
LSM7-202ENST00000585395 MT-ATP6P00846 226 aa20.55■□□□□ 0.88
LSM7-202ENST00000585395 YES1P07947 543 aa20.55■□□□□ 0.88
LSM7-202ENST00000585395 RHCEP18577 417 aa20.55■□□□□ 0.88
LSM7-202ENST00000585395 DNAJA1P31689 397 aaKnown RBP20.55■□□□□ 0.88
LSM7-202ENST00000585395 KIR2DL2P43627 348 aaPredicted RBP20.55■□□□□ 0.88
LSM7-202ENST00000585395 SMIM11AP58511 58 aa20.55■□□□□ 0.88
LSM7-202ENST00000585395 EGR4Q05215 589 aa20.55■□□□□ 0.88
LSM7-202ENST00000585395 OTUD3Q5T2D3 398 aaPredicted RBP20.55■□□□□ 0.88
LSM7-202ENST00000585395 ABLIM2Q6H8Q1 611 aa20.55■□□□□ 0.88
LSM7-202ENST00000585395 STK32CQ86UX6 486 aa20.55■□□□□ 0.88
LSM7-202ENST00000585395 ABHD3Q8WU67 409 aa20.55■□□□□ 0.88
LSM7-202ENST00000585395 KTI12Q96EK9 354 aaPredicted RBP20.55■□□□□ 0.88
LSM7-202ENST00000585395 FOXC2Q99958 501 aa20.55■□□□□ 0.88
LSM7-202ENST00000585395 ANKRD19PQ9H560 264 aa20.55■□□□□ 0.88
LSM7-202ENST00000585395 NDRG3Q9UGV2 375 aa20.55■□□□□ 0.88
LSM7-202ENST00000585395 V9GYQ6 96 aa20.55■□□□□ 0.88
LSM7-202ENST00000585395 IGHV3-15A0A0B4J1V0 119 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 ZNF724A8MTY0 619 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 CASKO14936 926 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 FABP3P05413 133 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 POU2F1P14859 743 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 EXOC3L2Q2M3D2 409 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 TMEM225Q6GV28 225 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 PGM2L1Q6PCE3 622 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 RRM2BQ7LG56 351 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 DNAJA3Q96EY1 480 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 CLPTM1LQ96KA5 538 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 ZNF300Q96RE9 604 aaPredicted RBP20.54■□□□□ 0.88
LSM7-202ENST00000585395 ZNF347Q96SE7 839 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 SF3B5Q9BWJ5 86 aaKnown RBP20.54■□□□□ 0.88
LSM7-202ENST00000585395 POLDIP3Q9BY77 421 aaKnown RBP20.54■□□□□ 0.88
LSM7-202ENST00000585395 LRMDAQ9H2I8 198 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 MAGIXQ9H6Y5 334 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 BCO1Q9HAY6 547 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 A4GNTQ9UNA3 340 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 RASD1Q9Y272 281 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 MED31Q9Y3C7 131 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 MPDZO75970 2070 aa20.54■□□□□ 0.88
LSM7-202ENST00000585395 IGKV1D-42A0A075B6H8 117 aa20.53■□□□□ 0.88
LSM7-202ENST00000585395 AQP7P3A6NL99 342 aa20.53■□□□□ 0.88
LSM7-202ENST00000585395 AQP12BA6NM10 295 aa20.53■□□□□ 0.88
LSM7-202ENST00000585395 IGF2P01344 180 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms