RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 CRNNQ9UBG3 495 aaPredicted RBP13.1□□□□□ -0.31
VAPA-209ENST00000585042 P2RX2Q9UBL9 471 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 RASD1Q9Y272 281 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 GPR45Q9Y5Y3 372 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 DSPPQ9NZW4 1301 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 ANK3Q12955 4377 aaKnown RBP13.09□□□□□ -0.31
VAPA-209ENST00000585042 ARPC4-TTLL3A0A0A6YYG9 625 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 LOC390937A0A1W2PQ73 354 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 B9A039 149 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 ZNF587BE7ETH6 402 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 ATP6V1G2-DDX39BF2Z307 99 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 RFXANKO14593 260 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 CRYAAP02489 173 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 C1QCP02747 245 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 ALDOCP09972 364 aaKnown RBP13.09□□□□□ -0.31
VAPA-209ENST00000585042 IL12AP29459 219 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 SERPINF1P36955 418 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 P2RY4P51582 365 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 CRISP3P54108 245 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 SNRPD2P62316 118 aaKnown RBP13.09□□□□□ -0.31
VAPA-209ENST00000585042 LARS2Q15031 903 aaKnown RBP13.09□□□□□ -0.31
VAPA-209ENST00000585042 COX20Q5RI15 118 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 ARFGEF3Q5TH69 2177 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 RNF220Q5VTB9 566 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 CREB3L2Q70SY1 520 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 OR52P1PQ8NH57 321 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 STK35Q8TDR2 534 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 HTRA1Q92743 480 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 SLC35B4Q969S0 331 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 PIMREGQ9BSJ6 248 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 LINC00470Q9BZP3 86 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 PNPOQ9NVS9 261 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 RLIMQ9NVW2 624 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 CUBNO60494 3623 aa13.09□□□□□ -0.31
VAPA-209ENST00000585042 IGHV1-18A0A0C4DH31 117 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 A0A0G2JPF8 293 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 VSTM5A8MXK1 200 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 HNRNPCL2B2RXH8 293 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 HNRNPCL3B7ZW38 293 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 SDHDO14521 159 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 KLF11O14901 512 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 HDAC3O15379 428 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 HNRNPCL1O60812 293 aaKnown RBP13.08□□□□□ -0.32
VAPA-209ENST00000585042 NPIPB7O75200 414 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 SNNO75324 88 aaPredicted RBP13.08□□□□□ -0.32
VAPA-209ENST00000585042 HNRNPCL4P0DMR1 293 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 CDKN2CP42773 168 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 NR4A2P43354 598 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 SH3BGRP55822 239 aaPredicted RBP13.08□□□□□ -0.32
VAPA-209ENST00000585042 UBE2NP61088 152 aaKnown RBP13.08□□□□□ -0.32
VAPA-209ENST00000585042 MAPK11Q15759 364 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 EFNB3Q15768 340 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 TBRG1Q3YBR2 411 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 HIKESHIQ53FT3 197 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 C1orf140Q5VVS0 124 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 FAM166AQ6J272 317 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 ANKRD16Q6P6B7 361 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 MSANTD1Q6ZTZ1 278 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 GPAT4Q86UL3 456 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 OR4F15Q8NGB8 312 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 OR1K1Q8NGR3 316 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 MFSD8Q8NHS3 518 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 LRRC8CQ8TDW0 803 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 BCL2L2Q92843 193 aaPredicted RBP13.08□□□□□ -0.32
VAPA-209ENST00000585042 FBXO17Q96EF6 278 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 CA10Q9NS85 328 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 IFT52Q9Y366 437 aa13.08□□□□□ -0.32
VAPA-209ENST00000585042 TMEM247A6NEH6 219 aa13.07□□□□□ -0.32
VAPA-209ENST00000585042 RPL36A-HNRNPH2H7BZ11 118 aa13.07□□□□□ -0.32
VAPA-209ENST00000585042 SLC22A3O75751 556 aa13.07□□□□□ -0.32
VAPA-209ENST00000585042 GSNP06396 782 aa13.07□□□□□ -0.32
VAPA-209ENST00000585042 GKN3PP0CG01 181 aa13.07□□□□□ -0.32
VAPA-209ENST00000585042 IDO1P14902 403 aa13.07□□□□□ -0.32
VAPA-209ENST00000585042 CDH2P19022 906 aaPredicted RBP13.07□□□□□ -0.32
VAPA-209ENST00000585042 MVDP53602 400 aa13.07□□□□□ -0.32
VAPA-209ENST00000585042 NME5P56597 212 aa13.07□□□□□ -0.32
VAPA-209ENST00000585042 PRAMEF8Q5VWM4 474 aa13.07□□□□□ -0.32
VAPA-209ENST00000585042 PRAMEF7Q5VXH5 474 aa13.07□□□□□ -0.32
VAPA-209ENST00000585042 ZNF836Q6ZNA1 936 aa13.07□□□□□ -0.32
VAPA-209ENST00000585042 VRK2Q86Y07 508 aa13.07□□□□□ -0.32
VAPA-209ENST00000585042 CCDC36Q8IYA8 594 aa13.07□□□□□ -0.32
VAPA-209ENST00000585042 SLC38A5Q8WUX1 472 aa13.07□□□□□ -0.32
VAPA-209ENST00000585042 SPATA9Q9BWV2 254 aa13.07□□□□□ -0.32
VAPA-209ENST00000585042 RMND5AQ9H871 391 aa13.07□□□□□ -0.32
VAPA-209ENST00000585042 CACYBPQ9HB71 228 aaKnown RBP13.07□□□□□ -0.32
VAPA-209ENST00000585042 KCNS2Q9ULS6 477 aa13.07□□□□□ -0.32
VAPA-209ENST00000585042 FRS3O43559 492 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 FZD7O75084 574 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 IGLV1-44P01699 117 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 NCF2P19878 526 aaPredicted RBP13.06□□□□□ -0.32
VAPA-209ENST00000585042 HNF1AP20823 631 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 CRATP43155 626 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 PPOXP50336 477 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 DSTNP60981 165 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 NAAAQ02083 359 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 PDCD4Q53EL6 469 aaKnown RBP13.06□□□□□ -0.32
VAPA-209ENST00000585042 TTMPQ5BVD1 217 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 C5orf46Q6UWT4 87 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 EPHX4Q8IUS5 362 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 CADM2Q8N3J6 435 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms