RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	NRF1	Q16656	503 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	DUSP7	Q16829	419 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	RABL3	Q5HYI8	236 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	ALG10B	Q5I7T1	473 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	FAM91A1	Q658Y4	838 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	ZNF704	Q6ZNC4	412 aa	Predicted RBP	11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	CALHM3	Q86XJ0	350 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	ZNF433	Q8N7K0	673 aa	Predicted RBP	11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	ZIC4	Q8N9L1	334 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	MFSD8	Q8NHS3	518 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	HSD17B8	Q92506	261 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	TAMM41	Q96BW9	452 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	KTI12	Q96EK9	354 aa	Predicted RBP	11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	TAPBPL	Q9BX59	468 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	PIF1	Q9H611	641 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	EVA1A	Q9H8M9	152 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	UBTD1	Q9HAC8	227 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	TAS2R16	Q9NYV7	291 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	ARMCX1	Q9P291	453 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	RPS6KB2	Q9UBS0	482 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	SLC13A4	Q9UKG4	626 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	CAPN7	Q9Y6W3	813 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760		M0QX08	132 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760		M0R3H8	397 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	SLC22A2	O15244	555 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	LGI1	O95970	557 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	PLAU	P00749	431 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	ITGA5	P08648	1049 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	GGT1	P19440	569 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	CD247	P20963	164 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	RPS5	P46782	204 aa	Known RBP	11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	FOXG1	P55316	489 aa	Predicted RBP	11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	FAP	Q12884	760 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	NPTX1	Q15818	432 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	ACKR1	Q16570	336 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	VMAC	Q2NL98	169 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	MMEL1	Q495T6	779 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	TIMM23B	Q5SRD1	257 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	ULK3	Q6PHR2	472 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	C5orf46	Q6UWT4	87 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	C20orf204	Q6ZNR8	217 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	PATL1	Q86TB9	770 aa	Known RBP	11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	GPAT4	Q86UL3	456 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	UBE2J2	Q8N2K1	259 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	SLC38A4	Q969I6	547 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	ZNF385A	Q96PM9	386 aa	Known RBP	11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	BDH2	Q9BUT1	245 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	AMBRA1	Q9C0C7	1298 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	SLC7A10	Q9NS82	523 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	PARPBP	Q9NWS1	579 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	ASB6	Q9NWX5	421 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760	ARID1A	O14497	2285 aa		11.72	□□□□□ -0.53
SREBF1-223	ENST00000584760		A0A087WUJ7	227 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	TRIM64	A6NGJ6	449 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	TRIM64B	A6NI03	449 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	OR5H1	A6NKK0	313 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	FMO6P	O60774	539 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	RAD51D	O75771	328 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	VAMP5	O95183	116 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	C8B	P07358	591 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	PPA1	Q15181	289 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	OR1Q1	Q15612	314 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	STK11	Q15831	433 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	NCMAP	Q5T1S8	102 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	SWT1	Q5T5J6	900 aa	Known RBP	11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	FAM69A	Q5T7M9	428 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	INTS11	Q5TA45	600 aa	Known RBP	11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	TSPO2	Q5TGU0	170 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	ALKBH2	Q6NS38	261 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	CREB3L2	Q70SY1	520 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	CCDC80	Q76M96	950 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	YTHDF3	Q7Z739	585 aa	Known RBP	11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	P2RY8	Q86VZ1	359 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	PCYOX1L	Q8NBM8	494 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	OR4D11	Q8NGI4	311 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	OR6T1	Q8NGN1	323 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	IGFBPL1	Q8WX77	278 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	TAAR8	Q969N4	342 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	SLC47A1	Q96FL8	570 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	PIP5K1A	Q99755	562 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	SH3GL1	Q99961	368 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	TMEM27	Q9HBJ8	222 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	NGB	Q9NPG2	151 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	NPAP1	Q9NZP6	1156 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	B3GAT1	Q9P2W7	334 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	SEC14L4	Q9UDX3	406 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	ADAM21	Q9UKJ8	722 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	RASD1	Q9Y272	281 aa		11.71	□□□□□ -0.53
SREBF1-223	ENST00000584760	PLCE1	Q9P212	2302 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	TRAV36DV7	A0A075B6V5	113 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	LOC100653049	A0A140TA62	436 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760		M0R082	166 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	OR2T1	O43869	369 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	KRT34	O76011	436 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	GTF2E2	P29084	291 aa	Known RBP	11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	CDH12	P55289	794 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	BSPH1	Q075Z2	132 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	GABRA6	Q16445	453 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	TMEM225	Q6GV28	225 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms