RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 SLC17A1Q14916 467 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 GTDC1Q4AE62 458 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 FAM120AOSQ5T036 256 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 OTUD3Q5T2D3 398 aaPredicted RBP9.77□□□□□ -0.85
CCDC47-206ENST00000584112 C17orf78Q8N4C9 275 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 C1orf162Q8NEQ5 155 aaPredicted RBP9.77□□□□□ -0.85
CCDC47-206ENST00000584112 GTF2H4Q92759 462 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 SLC35B4Q969S0 331 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 AURKBQ96GD4 344 aaPredicted RBP9.77□□□□□ -0.85
CCDC47-206ENST00000584112 SF3B5Q9BWJ5 86 aaKnown RBP9.77□□□□□ -0.85
CCDC47-206ENST00000584112 SPATA9Q9BWV2 254 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 TAPBPLQ9BX59 468 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 GRIP2Q9C0E4 1043 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 PIF1Q9H611 641 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 CHODLQ9H9P2 273 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 CISD1Q9NZ45 108 aaKnown RBP9.77□□□□□ -0.85
CCDC47-206ENST00000584112 DCTN4Q9UJW0 460 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 PCDHB14Q9Y5E9 798 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 RYR2Q92736 4967 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 ZC3H12DA2A288 527 aaKnown RBP9.76□□□□□ -0.85
CCDC47-206ENST00000584112 SLC35F4A4IF30 521 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 LIPT2A6NK58 231 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 AQP7P3A6NL99 342 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 SHISA9B4DS77 424 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 C5orf58C9J3I9 102 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 GPR37O15354 613 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 LMX1BO60663 402 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 VAMP5O95183 116 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 VENTXO95231 258 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 SOD3P08294 240 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 BMP2P12643 396 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 PPIBP23284 216 aaKnown RBP9.76□□□□□ -0.85
CCDC47-206ENST00000584112 PTAFRP25105 342 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 IRX1P78414 480 aaPredicted RBP9.76□□□□□ -0.85
CCDC47-206ENST00000584112 CEACAM7Q14002 265 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 RGNQ15493 299 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 OR7A5Q15622 319 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 GABRA6Q16445 453 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 ZNF311Q5JNZ3 666 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 RPS26P11Q5JNZ5 115 aaPredicted RBP9.76□□□□□ -0.85
CCDC47-206ENST00000584112 ABHD12BQ7Z5M8 362 aaPredicted RBP9.76□□□□□ -0.85
CCDC47-206ENST00000584112 ATG4DQ86TL0 474 aaPredicted RBP9.76□□□□□ -0.85
CCDC47-206ENST00000584112 RFLNBQ8N5W9 214 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 POMGNT2Q8NAT1 580 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 OR9K2Q8NGE7 335 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 OR52N5Q8NH56 324 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 BBS10Q8TAM1 723 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 DYDC1Q8WWB3 177 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 NEUROG1Q92886 237 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 TMEM45BQ96B21 275 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 MUS81Q96NY9 551 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 PKP2Q99959 881 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 CCDC28BQ9BUN5 200 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 PAIP1Q9H074 479 aaKnown RBP9.76□□□□□ -0.85
CCDC47-206ENST00000584112 BCL2L10Q9HD36 194 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 A4GALTQ9NPC4 353 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 NPAP1Q9NZP6 1156 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 AMDHD2Q9Y303 409 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 MAGED1Q9Y5V3 778 aaPredicted RBP9.76□□□□□ -0.85
CCDC47-206ENST00000584112 SLC25A15Q9Y619 301 aa9.76□□□□□ -0.85
CCDC47-206ENST00000584112 A0A096LNT2 108 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 PDLIM1O00151 329 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 AKR7A3O95154 331 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 ITGA5P08648 1049 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 ETS2P15036 469 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 NTF4P34130 210 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 CDKN1AP38936 164 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 ZNF83P51522 516 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 PGGHGQ32M88 737 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 LRIF1Q5T3J3 769 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 C1orf140Q5VVS0 124 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 AGAP6Q5VW22 663 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 TMEM225Q6GV28 225 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 SLC2A7Q6PXP3 512 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 BLOC1S3Q6QNY0 202 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 SLC22A25Q6T423 547 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 SERPINA11Q86U17 422 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 GPAT4Q86UL3 456 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 DTX2Q86UW9 622 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 CLIP4Q8N3C7 705 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 TMEM99Q8N816 258 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 OR52E4Q8NGH9 312 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 STK35Q8TDR2 534 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 GCDHQ92947 438 aaPredicted RBP9.75□□□□□ -0.85
CCDC47-206ENST00000584112 C3orf49Q96BT1 292 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 SPDL1Q96EA4 605 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 ATP6V1G3Q96LB4 118 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 TRAF4Q9BUZ4 470 aaPredicted RBP9.75□□□□□ -0.85
CCDC47-206ENST00000584112 SLCO5A1Q9H2Y9 848 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 BARX1Q9HBU1 254 aaPredicted RBP9.75□□□□□ -0.85
CCDC47-206ENST00000584112 SLC7A10Q9NS82 523 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 TMEM45AQ9NWC5 275 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 ADPRHL2Q9NX46 363 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 RPS6KB2Q9UBS0 482 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 POU2F3Q9UKI9 436 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 CORO2BQ9UQ03 480 aa9.75□□□□□ -0.85
CCDC47-206ENST00000584112 TMEM89A2RUT3 159 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 OR6C65A6NJZ3 312 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 TMEM229AB2RXF0 380 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 M0R1B8 84 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms