RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 OR1L4Q8NGR5 311 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 NEIL3Q8TAT5 605 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 FRAT1Q92837 279 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 FBXO32Q969P5 355 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 TMEM101Q96IK0 257 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 TCEANC2Q96MN5 208 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 TRIM62Q9BVG3 475 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 ROPN1BQ9BZX4 212 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 OR51J1Q9H342 316 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 NMRAL1Q9HBL8 299 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 AIG1Q9NVV5 245 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 THUMPD1Q9NXG2 353 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 ZNF639Q9UID6 485 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 KIF25Q9UIL4 384 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 IKZF2Q9UKS7 526 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 STAP1Q9ULZ2 295 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 ZNF256Q9Y2P7 627 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 ARHGAP23Q9P227 1491 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 PPIAL4EA0A075B759 164 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 A0A0J9YXY3 114 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 A0A1B0GVL5 298 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 CCDC169A6NNP5 214 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 UBXN8O00124 270 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 HAS3O00219 553 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 ABCD4O14678 606 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 AGPAT2O15120 278 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 ACTL6AO96019 429 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 KRTAP1-4P0C5Y4 121 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 PPIAL4FP0DN26 164 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 NCK1P16333 377 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 TBPP20226 339 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 ATP6V1B2P21281 511 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 RDXP35241 583 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 HSD17B2P37059 387 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 APOC4P55056 127 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 DLX1P56177 255 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 TAS2R19P59542 299 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 ERVK-25P63136 954 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 SCRN3Q0VDG4 424 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 DGUOKQ16854 277 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 RABL6Q3YEC7 729 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 BCL7AQ4VC05 210 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 MARCH8Q5T0T0 291 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 CASC10Q5T4H9 136 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 OR2G6Q5TZ20 316 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 ZNF544Q6NX49 715 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 TMIGD1Q6UXZ0 262 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 Q6ZN92 141 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 RNF165Q6ZSG1 346 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 TGIF2LYQ8IUE0 185 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 ZNF740Q8NDX6 193 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 OR52H1Q8NGJ2 320 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 STMN2Q93045 179 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 MRPL45Q9BRJ2 306 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 GON7Q9BXV9 100 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 C20orf85Q9H1P6 137 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 ANKRD19PQ9H560 264 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 ASB8Q9H765 288 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 NT5MQ9NPB1 228 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 IL26Q9NPH9 171 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 GLRX2Q9NS18 164 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 KCNIP1Q9NZI2 227 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 TRAF3IP3Q9Y228 551 aa2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 RRP15Q9Y3B9 282 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-209ENST00000583441 XKRY2A2RUG3 117 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 ARHGEF35A5YM69 484 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 FAM231BA6NCW3 169 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 A6NIZ1 184 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 TRIM49D1C9J1S8 452 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 HSD17B6O14756 317 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 MBTPS2O43462 519 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 SERPINA3P01011 423 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 HPNP05981 417 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 MCF2P10911 925 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 CXCR2P25025 360 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 CRYBB2P43320 205 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 HLCSP50747 726 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 RAP1BP61224 184 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 ATP6AP1Q15904 470 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 PRAMEF5Q5TYX0 476 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 PRAMEF6Q5VXH4 476 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 PP632Q6XCG6 107 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 LRRC74BQ6ZQY2 392 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 PRSS41Q7RTY9 318 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 SLC26A11Q86WA9 606 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 CEP112Q8N8E3 955 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 OR6C4Q8NGE1 309 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 OR9K2Q8NGE7 335 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 PYROXD1Q8WU10 500 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 FGF11Q92914 225 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 TUBGCP3Q96CW5 907 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 SLC35E1Q96K37 410 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 NRIP2Q9BQI9 281 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 CHRDL1Q9BU40 450 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 GBA3Q9H227 469 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 PDFQ9HBH1 243 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 MRPL47Q9HD33 250 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 GIN1Q9NXP7 522 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 IL17CQ9P0M4 197 aa2.6□□□□□ -1.99
SMCHD1-209ENST00000583441 KCNIP3Q9Y2W7 256 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms