RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	CCDC126	Q96EE4	140 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	TSNARE1	Q96NA8	513 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	GAL3ST4	Q96RP7	486 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	ATOH8	Q96SQ7	321 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	ZNF559	Q9BR84	538 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	TRAF4	Q9BUZ4	470 aa	Predicted RBP	2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	TBC1D10A	Q9BXI6	508 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	SHARPIN	Q9H0F6	387 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	ABCG4	Q9H172	646 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	SRMS	Q9H3Y6	488 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	NT5DC2	Q9H857	520 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	RAB9B	Q9NP90	201 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	ZNF71	Q9NQZ8	489 aa	Predicted RBP	2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	FBXO8	Q9NRD0	319 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	HRASLS2	Q9NWW9	162 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	HPF1	Q9NWY4	346 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	STOX2	Q9P2F5	926 aa	Predicted RBP	2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	GRID1	Q9ULK0	1009 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	PSMD13	Q9UNM6	376 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	PDE10A	Q9Y233	779 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	STK38L	Q9Y2H1	464 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	ZNF106	Q9H2Y7	1883 aa	Known RBP	2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	NOTCH3	Q9UM47	2321 aa		2.73	□□□□□ -1.97
MSI2-215	ENST00000582453	IGKV3D-15	A0A087WSY6	115 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453		A0A087X002	238 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	SPAAR	A0A1B0GVQ0	90 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	MEIOC	A2RUB1	952 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	FAM149A	A5PLN7	773 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	OR6C74	A6NCV1	312 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	ANKDD1B	A6NHY2	528 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	CYSRT1	A8MQ03	144 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	TMEM150C	B9EJG8	249 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	NPIPA3	F8WFD2	350 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453		H3BMH7	237 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453		K7EPI3	171 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	CDC7	O00311	574 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	BTN3A3	O00478	584 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	TXNDC9	O14530	226 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	TM9SF1	O15321	606 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	ATP6V0E1	O15342	81 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	NVL	O15381	856 aa	Known RBP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	BIRC5	O15392	142 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	TAPBP	O15533	448 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	TYROBP	O43914	113 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	PLIN3	O60664	434 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	SMIM24	O75264	130 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	CS	O75390	466 aa	Known RBP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	PRKRA	O75569	313 aa	Known RBP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	STK16	O75716	305 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	SHBG	P04278	402 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	RPS17	P08708	135 aa	Known RBP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	HBQ1	P09105	142 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	UGT2B7	P16662	529 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	TAC1	P20366	129 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	PTPRZ1	P23471	2315 aa	Predicted RBP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	CXCR2	P25025	360 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	CMPK1	P30085	196 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	PEBP1	P30086	187 aa	Known RBP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	HPD	P32754	393 aa	Predicted RBP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	CSTF2	P33240	577 aa	Known RBP eCLIP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	RPA3	P35244	121 aa	Predicted RBP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	TSFM	P43897	325 aa	Known RBP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	BDKRB1	P46663	353 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	GABRA4	P48169	554 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	DNAJB13	P59910	316 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	RPS15A	P62244	130 aa	Known RBP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	TBPL1	P62380	186 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	CCL7	P80098	99 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	ASPH	Q12797	758 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	ABR	Q12979	859 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	CASP8	Q14790	479 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	HERC3	Q15034	1050 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	P2RY6	Q15077	328 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	OR4D1	Q15615	310 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	RBBP7	Q16576	425 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	ZFP69	Q49AA0	526 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	GTDC1	Q4AE62	458 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	CCSMST1	Q4G0I0	132 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	GGTA1P	Q4G0N0	100 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	XKR6	Q5GH73	641 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	PAGE2B	Q5JRK9	111 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	FFAR4	Q5NUL3	377 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	AGBL2	Q5U5Z8	902 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	AGAP6	Q5VW22	663 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	ETFRF1	Q6IPR1	90 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	KRTAP5-11	Q6L8G4	156 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	ZYG11A	Q6WRX3	759 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	RNF165	Q6ZSG1	346 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	FRA10AC1	Q70Z53	315 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	CPEB2	Q7Z5Q1	589 aa	Known RBP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	CMC1	Q7Z7K0	106 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	ASPG	Q86U10	573 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	RTN4RL2	Q86UN3	420 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	PAQR7	Q86WK9	346 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	C17orf64	Q86WR6	236 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	ZNF843	Q8N446	348 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	DNAJC22	Q8N4W6	341 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	TBC1D19	Q8N5T2	526 aa		2.72	□□□□□ -1.97

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms