RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 NAGAP17050 411 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 POLR2HP52434 150 aaKnown RBP20.61■□□□□ 0.89
CCDC47-204ENST00000582252 ACTA2P62736 377 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 ACTG2P63267 376 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 TBC1D25Q3MII6 688 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 EMC4Q5J8M3 183 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 B4GALNT2Q8NHY0 566 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 ABTB1Q969K4 478 aaPredicted RBP20.61■□□□□ 0.89
CCDC47-204ENST00000582252 TMED9Q9BVK6 235 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 RERGLQ9H628 205 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 OCIAD1Q9NX40 245 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 YARS2Q9Y2Z4 477 aaKnown RBP20.61■□□□□ 0.89
CCDC47-204ENST00000582252 ADAM18Q9Y3Q7 739 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 TRAV36DV7A0A075B6V5 113 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 AGRPO00253 132 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 RNF13O43567 381 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 UPK1BO75841 260 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 OR2T7P0C7T2 308 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 ERVK-25P63136 954 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 EGR4Q05215 589 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 TRIP6Q15654 476 aaKnown RBP20.6■□□□□ 0.89
CCDC47-204ENST00000582252 C5orf46Q6UWT4 87 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 CCDC190Q86UF4 302 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 LSRQ86X29 649 aaPredicted RBP20.6■□□□□ 0.89
CCDC47-204ENST00000582252 PARP16Q8N5Y8 322 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 GALNT6Q8NCL4 622 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 NPEPL1Q8NDH3 523 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 OR2T27Q8NH04 317 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 PPP1R14BQ96C90 147 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 RNF31Q96EP0 1072 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 BARHL1Q9BZE3 327 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 RTN4RQ9BZR6 473 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 STRADBQ9C0K7 418 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 ISG20L2Q9H9L3 353 aaKnown RBP20.6■□□□□ 0.89
CCDC47-204ENST00000582252 KLHL1Q9NR64 748 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 GPN3Q9UHW5 284 aaPredicted RBP20.6■□□□□ 0.89
CCDC47-204ENST00000582252 UGT2A1Q9Y4X1 527 aa20.6■□□□□ 0.89
CCDC47-204ENST00000582252 MEN1O00255 615 aa20.59■□□□□ 0.89
CCDC47-204ENST00000582252 GABRPO00591 440 aa20.59■□□□□ 0.89
CCDC47-204ENST00000582252 RGS9O75916 674 aaPredicted RBP20.59■□□□□ 0.89
CCDC47-204ENST00000582252 GYPBP06028 91 aa20.59■□□□□ 0.89
CCDC47-204ENST00000582252 UQCRC1P31930 480 aa20.59■□□□□ 0.89
CCDC47-204ENST00000582252 AQP2P41181 271 aa20.59■□□□□ 0.89
CCDC47-204ENST00000582252 HTR3AP46098 478 aa20.59■□□□□ 0.89
CCDC47-204ENST00000582252 INSM1Q01101 510 aaPredicted RBP20.59■□□□□ 0.89
CCDC47-204ENST00000582252 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.59■□□□□ 0.894e-7■■■□□ 16
CCDC47-204ENST00000582252 TMEM205Q6UW68 189 aa20.59■□□□□ 0.89
CCDC47-204ENST00000582252 ARIH2OSQ8N7S6 290 aa20.59■□□□□ 0.89
CCDC47-204ENST00000582252 MOSPD2Q8NHP6 518 aa20.59■□□□□ 0.89
CCDC47-204ENST00000582252 TMEM234Q8WY98 164 aa20.59■□□□□ 0.89
CCDC47-204ENST00000582252 SPSB2Q99619 263 aa20.59■□□□□ 0.89
CCDC47-204ENST00000582252 CMKLR1Q99788 373 aa20.59■□□□□ 0.89
CCDC47-204ENST00000582252 SLC30A2Q9BRI3 323 aa20.59■□□□□ 0.89
CCDC47-204ENST00000582252 WDR54Q9H977 334 aa20.59■□□□□ 0.89
CCDC47-204ENST00000582252 TAS2R10Q9NYW0 307 aa20.59■□□□□ 0.89
CCDC47-204ENST00000582252 PTPRZ1P23471 2315 aaPredicted RBP20.59■□□□□ 0.89
CCDC47-204ENST00000582252 TRBV11-1A0A0K0K1C0 115 aa20.58■□□□□ 0.89
CCDC47-204ENST00000582252 RGS5O15539 181 aa20.58■□□□□ 0.89
CCDC47-204ENST00000582252 MT-ATP6P00846 226 aa20.58■□□□□ 0.89
CCDC47-204ENST00000582252 SDHAP31040 664 aa20.58■□□□□ 0.89
CCDC47-204ENST00000582252 TMED10P49755 219 aaKnown RBP20.58■□□□□ 0.89
CCDC47-204ENST00000582252 SUMO3P55854 103 aaPredicted RBP20.58■□□□□ 0.89
CCDC47-204ENST00000582252 CTXN1P60606 82 aa20.58■□□□□ 0.89
CCDC47-204ENST00000582252 MXD1Q05195 221 aa20.58■□□□□ 0.89
CCDC47-204ENST00000582252 HNRNPA0Q13151 305 aaKnown RBP20.58■□□□□ 0.89
CCDC47-204ENST00000582252 GRINAQ7Z429 371 aa20.58■□□□□ 0.89
CCDC47-204ENST00000582252 MARCH9Q86YJ5 346 aa20.58■□□□□ 0.89
CCDC47-204ENST00000582252 BMPERQ8N8U9 685 aa20.58■□□□□ 0.89
CCDC47-204ENST00000582252 WDFY2Q96P53 400 aa20.58■□□□□ 0.89
CCDC47-204ENST00000582252 MOGAT1Q96PD6 335 aa20.58■□□□□ 0.89
CCDC47-204ENST00000582252 APMAPQ9HDC9 416 aa20.58■□□□□ 0.89
CCDC47-204ENST00000582252 FBXL4Q9UKA2 621 aa20.58■□□□□ 0.89
CCDC47-204ENST00000582252 CMAHPQ9Y471 501 aa20.58■□□□□ 0.89
CCDC47-204ENST00000582252 EXPH5Q8NEV8 1989 aa20.58■□□□□ 0.89
CCDC47-204ENST00000582252 CASKO14936 926 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 ZFAND5O76080 213 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 TXNDC12O95881 172 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 SPI1P17947 270 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 F8A1P23610 371 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 SDC2P34741 201 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 DIO1P49895 249 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 SLC25A1P53007 311 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 ZNF85Q03923 595 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 HSF2Q03933 536 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 OXA1LQ15070 435 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 QPRTQ15274 297 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 CDCP2Q5VXM1 449 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 GPR139Q6DWJ6 353 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 LRRC75AQ8NAA5 344 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 RASD2Q96D21 266 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 ZMYND19Q96E35 227 aaPredicted RBP20.58■□□□□ 0.88
CCDC47-204ENST00000582252 KTI12Q96EK9 354 aaPredicted RBP20.58■□□□□ 0.88
CCDC47-204ENST00000582252 NMNAT3Q96T66 252 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 NMNAT2Q9BZQ4 307 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 TPK1Q9H3S4 243 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 MOKQ9UQ07 419 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 CEP250Q9BV73 2442 aa20.58■□□□□ 0.88
CCDC47-204ENST00000582252 TEX13CA0A0J9YWL9 993 aa20.57■□□□□ 0.88
CCDC47-204ENST00000582252 B4E171 279 aa20.57■□□□□ 0.88
CCDC47-204ENST00000582252 SNX4O95219 450 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms