RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 DUSP6Q16828 381 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 TMEM200AQ86VY9 491 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 C12orf76Q8N812 135 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 TSSK2Q96PF2 358 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 A3GALT2U3KPV4 340 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 OR52A4PA6NMU1 304 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 TK1P04183 234 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 OR8G3PP0DMU2 310 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 FOLR1P15328 257 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 TAZQ16635 292 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 Q499Y3 187 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 TMEM41BQ5BJD5 291 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 ZNF705AQ6ZN79 300 aaPredicted RBP13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 ZNF765Q7L2R6 523 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 ARRDC2Q8TBH0 407 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 WDR76Q9H967 626 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 SLC22A11Q9NSA0 550 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 GMPR2Q9P2T1 348 aaKnown RBP13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 PCDHGA1Q9Y5H4 931 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 KCNK5O95279 499 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 FCGR2AP12318 317 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 KITLGP21583 273 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 APEX1P27695 318 aaKnown RBP13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 SLC38A5Q8WUX1 472 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 SEC22AQ96IW7 307 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 SFXN2Q96NB2 322 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 LIN7BQ9HAP6 207 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 SIAEQ9HAT2 523 aa13.52□□□□□ -0.24
CSNK1D-217ENST00000581241 GNB3P16520 340 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 ECI1P42126 302 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 VASPP50552 380 aaPredicted RBP13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 CTSCP53634 463 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 CLDN12P56749 244 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 MRPS34P82930 218 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 TNFRSF17Q02223 184 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 GLYR1Q49A26 553 aaPredicted RBP13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 MKXQ8IYA7 352 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 PLPP5Q8NEB5 264 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 TMEM174Q8WUU8 243 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 PIGCQ92535 297 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 SIDT1Q9NXL6 827 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 PCDHGA5Q9Y5G8 931 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 H0YIV9 168 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 SULT1B1O43704 296 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 SUSD5O60279 629 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 PSMB5P28074 263 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 FOLR3P41439 243 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 STEAP1BQ6NZ63 245 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 MCATQ8IVS2 390 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 ZNF610Q8N9Z0 462 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 TIMM29Q9BSF4 260 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 LHX3Q9UBR4 397 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 LAMB4A4D0S4 1761 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 BHLHE40O14503 412 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 NOVP48745 357 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 SNRPGP62308 76 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 SRPXP78539 464 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 DSC1Q08554 894 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 LANCL3Q6ZV70 420 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 OR52H1Q8NGJ2 320 aa13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 NKX6-2Q9C056 277 aaPredicted RBP13.52□□□□□ -0.25
CSNK1D-217ENST00000581241 VIPR2P41587 438 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 KCNJ10P78508 379 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 SF3B4Q15427 424 aaKnown RBP eCLIP13.51□□□□□ -0.254e-8■■■■□ 26.7
CSNK1D-217ENST00000581241 KCTD11Q693B1 232 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 KDM4DQ6B0I6 523 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 PARS2Q7L3T8 475 aaKnown RBP13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 MDGA2Q7Z553 956 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 ALG12Q9BV10 488 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 VN1R3Q9BXE9 311 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.51□□□□□ -0.258e-7■■■■□ 19.3
CSNK1D-217ENST00000581241 DNAJB11Q9UBS4 358 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 MYADML2A6NDP7 307 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 POU3F2P20265 443 aaPredicted RBP13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 CASP6P55212 293 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 DCAF7P61962 342 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 RPE65Q16518 533 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 PRICKLE2Q7Z3G6 844 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 NAA40Q86UY6 237 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 PSMF1Q92530 271 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 SLC35B4Q969S0 331 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 CASD1Q96PB1 797 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 ENKD1Q9H0I2 346 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 MRPS28Q9Y2Q9 187 aaKnown RBP13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 EEF1A1P68104 462 aaKnown RBP13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 ALKBH1Q13686 389 aaKnown RBP13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 TMEM201Q5SNT2 666 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 HTR3DQ70Z44 454 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 OR52N1Q8NH53 320 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 UQCC2Q9BRT2 126 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 SAGE1Q9NXZ1 904 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 SLC23A2Q9UGH3 650 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 LOC100289279A0A1B0GTE1 492 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 PMP2P02689 132 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 F13BP05160 661 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 FURINP09958 794 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 TSFMP43897 325 aaKnown RBP13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 CHRNEQ04844 493 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 BAXQ07812 192 aa13.51□□□□□ -0.25
CSNK1D-217ENST00000581241 ACSM1Q08AH1 577 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms