RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	RPS23	P62266	143 aa	Known RBP	5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	CCL8	P80075	99 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	GUCY1A3	Q02108	690 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	SLC3A1	Q07837	685 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	DBP	Q10586	325 aa	Predicted RBP	5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	PCGF3	Q3KNV8	242 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	SLC35F1	Q5T1Q4	408 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	ABLIM2	Q6H8Q1	611 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	TMEM154	Q6P9G4	183 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	BTNL3	Q6UXE8	466 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	FKBP9P1	Q75LS8	142 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	OR10S1	Q8NGN2	331 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	OR1K1	Q8NGR3	316 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	OR4C3	Q8NH37	302 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	PHOSPHO1	Q8TCT1	267 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	GPR151	Q8TDV0	419 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	SNX33	Q8WV41	574 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	EXT2	Q93063	718 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	EXOSC8	Q96B26	276 aa	Known RBP	5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	TM4SF18	Q96CE8	201 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	MRPL1	Q9BYD6	325 aa	Known RBP	5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	DERL2	Q9GZP9	239 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	SERHL2	Q9H4I8	314 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	CRLF2	Q9HC73	371 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	TNFRSF12A	Q9NP84	129 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	UBQLN4	Q9NRR5	601 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	IL20RA	Q9UHF4	553 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	PACSIN2	Q9UNF0	486 aa	Predicted RBP	5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158	TFR2	Q9UP52	801 aa		5.04	□□□□□ -1.6
KPNB1-209	ENST00000580158		A0A096LPK6	155 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158		A0A1W2PQD3	144 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	WI2-2373I1.2	A0A1W2PRP0	233 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	TRIM49D1	C9J1S8	452 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	POC1B-GALNT4	F8VUJ3	575 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158		H3BNH8	94 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	GTPBP1	O00178	669 aa	Known RBP	5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	NR5A2	O00482	541 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	GPR137B	O60478	399 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	UGDH	O60701	494 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	SKAP2	O75563	359 aa	Predicted RBP	5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	MELTF	P08582	738 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	CTAGE8	P0CG41	777 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	TFPI	P10646	304 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	PGAM1	P18669	254 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	TYK2	P29597	1187 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	GLRX	P35754	106 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	ARR3	P36575	388 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	ARL1	P40616	181 aa	Predicted RBP	5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	SUMO3	P55854	103 aa	Predicted RBP	5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	TRA2B	P62995	288 aa	Known RBP	5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	TUBA1B	P68363	451 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	TUBA4A	P68366	448 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	GALK2	Q01415	458 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	PAX8	Q06710	450 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	NPRL3	Q12980	569 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	CRYM	Q14894	314 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	MAD2L1BP	Q15013	274 aa	Predicted RBP	5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	TRADD	Q15628	312 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	VPS26B	Q4G0F5	336 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	TTMP	Q5BVD1	217 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	SPANXN3	Q5MJ09	141 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	TEDDM1	Q5T9Z0	273 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	GPR157	Q5UAW9	335 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	GKAP1	Q5VSY0	366 aa	Predicted RBP	5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	TTC19	Q6DKK2	380 aa	Predicted RBP	5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	DHRS7B	Q6IAN0	325 aa	Predicted RBP	5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	LRRN1	Q6UXK5	716 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158		Q6ZSV7	163 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	USP51	Q70EK9	711 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	TUBA1A	Q71U36	451 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	MTERF4	Q7Z6M4	381 aa	Known RBP	5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	CTAGE4	Q8IX94	777 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	C1orf174	Q8IYL3	243 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	SYCE1	Q8N0S2	351 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	METTL4	Q8N3J2	472 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	GALNT4	Q8N4A0	578 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	TMCO5A	Q8N6Q1	288 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	TEX9	Q8N6V9	391 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	OR4F17	Q8NGA8	305 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	MAGEE2	Q8TD90	523 aa	Predicted RBP	5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	MGARP	Q8TDB4	240 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	ANKRD49	Q8WVL7	239 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	LRTOMT	Q8WZ04	291 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	UPRT	Q96BW1	309 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	ZG16B	Q96DA0	208 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	CERS2	Q96G23	380 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	C16orf58	Q96GQ5	468 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	OR4F4	Q96R69	305 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	LMF2	Q9BU23	707 aa	Known RBP	5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	VPS11	Q9H270	941 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	SEC61A2	Q9H9S3	476 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	NOX3	Q9HBY0	568 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	DDX18	Q9NVP1	670 aa	Known RBP	5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	ERVK13-1	Q9NX77	482 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	OR5V1	Q9UGF6	321 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	TAGLN3	Q9UI15	199 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	RPUSD1	Q9UJJ7	312 aa	Known RBP	5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	NFU1	Q9UMS0	254 aa		5.03	□□□□□ -1.6
KPNB1-209	ENST00000580158	MYRF	Q9Y2G1	1151 aa		5.03	□□□□□ -1.6

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