RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 SMPDL3BQ92485 455 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 CDS1Q92903 461 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 RBPMSQ93062 196 aaKnown RBP4.87□□□□□ -1.63
CDH8-206ENST00000580044 NACC2Q96BF6 587 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 RBM18Q96H35 190 aaKnown RBP4.87□□□□□ -1.63
CDH8-206ENST00000580044 PAWRQ96IZ0 340 aaKnown RBP4.87□□□□□ -1.63
CDH8-206ENST00000580044 C4orf36Q96KX1 117 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 ZFP3Q96NJ6 502 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 CCNL2Q96S94 520 aaPredicted RBP4.87□□□□□ -1.63
CDH8-206ENST00000580044 ABHD1Q96SE0 405 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 TIMP4Q99727 224 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 AIFM2Q9BRQ8 373 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 UTP23Q9BRU9 249 aaKnown RBP4.87□□□□□ -1.63
CDH8-206ENST00000580044 TRMT61BQ9BVS5 477 aaKnown RBP4.87□□□□□ -1.63
CDH8-206ENST00000580044 DPH1Q9BZG8 443 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 TRIM2Q9C040 744 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 ZNF350Q9GZX5 532 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 QRSL1Q9H0R6 528 aaKnown RBP4.87□□□□□ -1.63
CDH8-206ENST00000580044 SLITRK2Q9H156 845 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 LINC00597Q9H2U6 94 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 NARFLQ9H6Q4 476 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 KIR3DX1Q9H7L2 352 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 HEXA-AS1Q9H8Q6 139 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 BARX1Q9HBU1 254 aaPredicted RBP4.87□□□□□ -1.63
CDH8-206ENST00000580044 LYRM4Q9HD34 91 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 CD93Q9NPY3 652 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 EQTNQ9NQ60 294 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 NANSQ9NR45 359 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 DLL4Q9NR61 685 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 HCFC1R1Q9NWW0 138 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 CLDND1Q9NY35 253 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 OR6C2Q9NZP2 312 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 DEC1Q9P2X7 70 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 RPS6KB2Q9UBS0 482 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 FBXL3Q9UKT7 428 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 PCDHB10Q9UN67 800 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 PRELID1Q9Y255 219 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 SIGLEC7Q9Y286 467 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 SIT1Q9Y3P8 196 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 CHST2Q9Y4C5 530 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 ATG4BQ9Y4P1 393 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 NOTCH4Q99466 2003 aa4.87□□□□□ -1.63
CDH8-206ENST00000580044 IGKV1-8A0A0C4DH67 115 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 A0A0G2JN53 185 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 RPS10-NUDT3A0A1W2PQS6 291 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 GXYLT2A0PJZ3 443 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 UBE2QL1A1L167 161 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 OR6C65A6NJZ3 312 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 GLOD5A6NK44 160 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 FAM183AA6NL82 134 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 HSPB2A8KAH6 182 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 SMLR1H3BR10 107 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 J3QLW9 94 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 L7N2F9 121 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 ACOT7O00154 380 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 AIPO00170 330 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 CDC42EP2O14613 210 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 FRS3O43559 492 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 LANCL1O43813 399 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 PRKRAO75569 313 aaKnown RBP4.86□□□□□ -1.63
CDH8-206ENST00000580044 RP2O75695 350 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 B3GALNT1O75752 331 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 NDUFB2O95178 105 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 SLC2A10O95528 541 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 WDPCPO95876 746 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 MT-ND4P03905 459 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 THY1P04216 161 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 CSF1P09603 554 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 CD3GP09693 182 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 TACSTD2P09758 323 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 TFPIP10646 304 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 ZNF19P17023 458 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 ATF1P18846 271 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 MAT2AP31153 395 aaKnown RBP4.86□□□□□ -1.63
CDH8-206ENST00000580044 PYCR1P32322 319 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 P2RY2P41231 377 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 GPR143P51810 404 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 BLVRAP53004 296 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 SLC16A1P53985 500 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 PSMD4P55036 377 aaKnown RBP4.86□□□□□ -1.63
CDH8-206ENST00000580044 GMFBP60983 142 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 TSPAN5P62079 268 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 SIRPAP78324 504 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 NTHL1P78549 312 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 DGCR2P98153 550 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 ZNF85Q03923 595 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 TLE2Q04725 743 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 SSBP1Q04837 148 aaKnown RBP4.86□□□□□ -1.63
CDH8-206ENST00000580044 PUDPQ08623 228 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 MADCAM1Q13477 382 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 CAMK1Q14012 370 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 ZNF234Q14588 700 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 MFSD13AQ14CX5 517 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 PON3Q15166 354 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 PDGFRLQ15198 375 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 IRF4Q15306 451 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 HSPB2Q16082 182 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 RPE65Q16518 533 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 UAP1L1Q3KQV9 507 aa4.86□□□□□ -1.63
CDH8-206ENST00000580044 SLC25A35Q3KQZ1 300 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms