RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 ZXDCQ2QGD7 858 aaPredicted RBP5.36□□□□□ -1.55
DDX42-210ENST00000579539 RFTN2Q52LD8 501 aaPredicted RBP5.36□□□□□ -1.55
DDX42-210ENST00000579539 USP39Q53GS9 565 aaKnown RBP5.36□□□□□ -1.55
DDX42-210ENST00000579539 RNASE10Q5GAN6 216 aaKnown RBP5.36□□□□□ -1.55
DDX42-210ENST00000579539 SAPCD1Q5SSQ6 148 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 ZNF660Q6AZW8 331 aaPredicted RBP5.36□□□□□ -1.55
DDX42-210ENST00000579539 DOK6Q6PKX4 331 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 TMEM207Q6UWW9 146 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 TRMT1LQ7Z2T5 733 aaKnown RBP5.36□□□□□ -1.55
DDX42-210ENST00000579539 ANKRD46Q86W74 232 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 LDLRAD3Q86YD5 345 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 FAM217AQ8IXS0 508 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 GPR65Q8IYL9 337 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 DEFB106AQ8N104 65 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 PGBD5Q8N414 524 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 RYBPQ8N488 228 aaPredicted RBP5.36□□□□□ -1.55
DDX42-210ENST00000579539 RASGEF1AQ8N9B8 481 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 SYT14Q8NB59 555 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 TMEM185AQ8NFB2 350 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 OR6J1Q8NGC5 347 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 OR8J2Q8NGG1 315 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 OR4L1Q8NH43 312 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 AKR7LQ8NHP1 331 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 NEIL3Q8TAT5 605 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 C2CD4CQ8TF44 421 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 MRPS31Q92665 395 aaKnown RBP5.36□□□□□ -1.55
DDX42-210ENST00000579539 ARL11Q969Q4 196 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 EXOSC8Q96B26 276 aaKnown RBP5.36□□□□□ -1.55
DDX42-210ENST00000579539 CXorf40BQ96DE9 158 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 RSPRY1Q96DX4 576 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 SAT2Q96F10 170 aaPredicted RBP5.36□□□□□ -1.55
DDX42-210ENST00000579539 ZNF845Q96IR2 970 aaPredicted RBP5.36□□□□□ -1.55
DDX42-210ENST00000579539 CXorf58Q96LI9 332 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 LRFN5Q96NI6 719 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 WRAP53Q9BUR4 548 aaKnown RBP5.36□□□□□ -1.55
DDX42-210ENST00000579539 FICDQ9BVA6 458 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 TMED9Q9BVK6 235 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 KRTAP3-1Q9BYR8 98 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 TPSD1Q9BZJ3 242 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 TM6SF2Q9BZW4 377 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 MFFQ9GZY8 342 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 OR51V1Q9H2C8 321 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 MVB12BQ9H7P6 319 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.36□□□□□ -1.55
DDX42-210ENST00000579539 MED17Q9NVC6 651 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 OSER1Q9NX31 292 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 OR6C2Q9NZP2 312 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 EIF2B4Q9UI10 523 aaKnown RBP5.36□□□□□ -1.55
DDX42-210ENST00000579539 SIX4Q9UIU6 781 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 EXO1Q9UQ84 846 aaKnown RBP5.36□□□□□ -1.55
DDX42-210ENST00000579539 PTRH2Q9Y3E5 179 aaKnown RBP5.36□□□□□ -1.55
DDX42-210ENST00000579539 TMED3Q9Y3Q3 217 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 TMEM184BQ9Y519 407 aaPredicted RBP5.36□□□□□ -1.55
DDX42-210ENST00000579539 DSPPQ9NZW4 1301 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 ARFGEF1Q9Y6D6 1849 aa5.36□□□□□ -1.55
DDX42-210ENST00000579539 MYH9P35579 1960 aaKnown RBP5.36□□□□□ -1.55
DDX42-210ENST00000579539 COL2A1P02458 1487 aaPredicted RBP5.35□□□□□ -1.55
DDX42-210ENST00000579539 IGKV6D-21A0A0A0MT36 114 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 TRAV1-2A0A0B4J238 106 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.35□□□□□ -1.55
DDX42-210ENST00000579539 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.35□□□□□ -1.55
DDX42-210ENST00000579539 URADA6NGE7 173 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 RFPL4AA6NLU0 287 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 TMEM210A6NLX4 147 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 COLCA2A8K830 154 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 GRXCR1A8MXD5 290 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 MAGEB17A8MXT2 336 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 CDRT15L2A8MXV6 281 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 WASH3PC4AMC7 463 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 C9JVG2 144 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 RFPL4AL1F8VTS6 287 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 FAAHO00519 579 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 CLDN4O14493 209 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 DNAJB6O75190 326 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 SH3BGRLO75368 114 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 NDUFS3O75489 264 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 APBB3O95704 486 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 PEX11BO96011 259 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 IGHV2-5P01817 119 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 GALTP07902 379 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 C1GALT1C1LP0DN25 315 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 HAPLN1P10915 354 aaPredicted RBP5.35□□□□□ -1.55
DDX42-210ENST00000579539 BCKDHAP12694 445 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 INSRRP14616 1297 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 DAOP14920 347 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 HIST1H1BP16401 226 aaKnown RBP5.35□□□□□ -1.55
DDX42-210ENST00000579539 ELK1P19419 428 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 HLA-DPA1P20036 260 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 FPR3P25089 353 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 ITPKBP27987 946 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 PTPN6P29350 595 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 CRABP1P29762 137 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 CHI3L1P36222 383 aaPredicted RBP5.35□□□□□ -1.55
DDX42-210ENST00000579539 SOX3P41225 446 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 GLP1RP43220 463 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 AVPR1BP47901 424 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 TTPAP49638 278 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 SMSP52788 366 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 ART1P52961 327 aa5.35□□□□□ -1.55
DDX42-210ENST00000579539 TAS2R43P59537 309 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms