RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 CDS1Q92903 461 aa11.91□□□□□ -0.5
CSNK1D-211ENST00000579316 FCRL1Q96LA6 429 aa11.91□□□□□ -0.5
CSNK1D-211ENST00000579316 C1orf147Q96MC9 270 aaPredicted RBP11.91□□□□□ -0.5
CSNK1D-211ENST00000579316 C1QTNF5Q9BXJ0 243 aa11.91□□□□□ -0.5
CSNK1D-211ENST00000579316 MMP27Q9H306 513 aa11.91□□□□□ -0.5
CSNK1D-211ENST00000579316 TPK1Q9H3S4 243 aa11.91□□□□□ -0.5
CSNK1D-211ENST00000579316 PIGUQ9H490 435 aa11.91□□□□□ -0.5
CSNK1D-211ENST00000579316 ACER3Q9NUN7 267 aa11.91□□□□□ -0.5
CSNK1D-211ENST00000579316 PNPOQ9NVS9 261 aa11.91□□□□□ -0.5
CSNK1D-211ENST00000579316 SPIN1Q9Y657 262 aaPredicted RBP11.91□□□□□ -0.5
CSNK1D-211ENST00000579316 SH3PXD2BA1X283 911 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 DYNC1I1O14576 645 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 HDAC3O15379 428 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 HPXP02790 462 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 RNASE1P07998 156 aaKnown RBP11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 KITP10721 976 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 SDC1P18827 310 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 COL8A2P25067 703 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 HPCAL1P37235 193 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 RPL3P39023 403 aaKnown RBP11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 CLK1P49759 484 aaKnown RBP11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 CCR4P51679 360 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 SLC17A1Q14916 467 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 RFTN2Q52LD8 501 aaPredicted RBP11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 C6orf136Q5SQH8 315 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 REP15Q6BDI9 236 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 CDC73Q6P1J9 531 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 RBMS3Q6XE24 437 aaKnown RBP11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 SZRD1Q7Z422 152 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 SIGLECL1Q8N7X8 197 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 RFWD2Q8NHY2 731 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 MAGEE2Q8TD90 523 aaPredicted RBP11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 TMEM234Q8WY98 164 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 JADE3Q92613 823 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 CIDECQ96AQ7 238 aaPredicted RBP11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 ARL5BQ96KC2 179 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 PPP1R36Q96LQ0 422 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 C3orf30Q96M34 536 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 MAGEB18Q96M61 343 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 C7orf26Q96N11 449 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 NUF2Q9BZD4 464 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 LAT2Q9GZY6 243 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 MEAF6Q9HAF1 191 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 ZNF275Q9NSD4 429 aaPredicted RBP11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 TMEM45AQ9NWC5 275 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 NOP53Q9NZM5 478 aaKnown RBP11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 MARCOQ9UEW3 520 aaPredicted RBP11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 CHRNA9Q9UGM1 479 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 OPN4Q9UHM6 478 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 TRAPPC4Q9Y296 219 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 MMP24Q9Y5R2 645 aa11.9□□□□□ -0.5
CSNK1D-211ENST00000579316 CLDN34H7C241 214 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 PLPP2O43688 288 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 SYNGR3O43761 229 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 TBX19O60806 448 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 RP2O75695 350 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 MPZL1O95297 269 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 TFPIP10646 304 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 BCKDHAP12694 445 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 LBPP18428 481 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 CDH2P19022 906 aaPredicted RBP11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 GATA3P23771 443 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 FKBP2P26885 142 aaKnown RBP11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 APOBEC1P41238 236 aaKnown RBP11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 UBE2NP61088 152 aaKnown RBP11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 EMX2Q04743 252 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 R3HCC1LQ7Z5L2 792 aaKnown RBP11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 ABHD12BQ7Z5M8 362 aaPredicted RBP11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 C22orf15Q8WYQ4 148 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 BCL2L2Q92843 193 aaPredicted RBP11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 YIPF5Q969M3 257 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 MTERF3Q96E29 417 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 TSSK3Q96PN8 268 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 C1orf50Q9BV19 199 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 THUMPD3Q9BV44 507 aaKnown RBP11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 CCDC106Q9BWC9 280 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 ZNF416Q9BWM5 594 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 ZNF665Q9H7R5 613 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 REV1Q9UBZ9 1251 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 GIMAP2Q9UG22 337 aa11.89□□□□□ -0.51
CSNK1D-211ENST00000579316 IGHV2OR16-5A0A0B4J2B6 119 aa11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 M0R233 179 aa11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 ANKRD28O15084 1053 aa11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 PPIHO43447 177 aaKnown RBP11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 EIF1BO60739 113 aaKnown RBP11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 DEAF1O75398 565 aaPredicted RBP11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 HMGN2P05204 90 aaKnown RBP11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 GSNP06396 782 aa11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 HOXB1P14653 301 aaPredicted RBP11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 DCST2Q5T1A1 773 aa11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 DCAF12L2Q5VW00 463 aa11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 IL23RQ5VWK5 629 aa11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 ANKRD26P1Q6NSI1 321 aa11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 MYPOPQ86VE0 399 aaPredicted RBP11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 ZIC4Q8N9L1 334 aa11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 PPCDCQ96CD2 204 aa11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 FAM120BQ96EK7 910 aaKnown RBP11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 EGLN2Q96KS0 407 aa11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 PRPF18Q99633 342 aaKnown RBP11.88□□□□□ -0.51
CSNK1D-211ENST00000579316 NELFAQ9H3P2 528 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms