RNA–Protein interactions for RNA: ENST00000578954.5

SS18-211, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-211ENST00000578954 AGFG1P52594 562 aaKnown RBP14.48□□□□□ -0.09
SS18-211ENST00000578954 SUCLG1P53597 346 aaKnown RBP14.48□□□□□ -0.09
SS18-211ENST00000578954 RAC3P60763 192 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 CSNK2A1P68400 391 aaPredicted RBP14.48□□□□□ -0.09
SS18-211ENST00000578954 SLC35A1P78382 337 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 H3F3AP84243 136 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 CDK5Q00535 292 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 ZP4Q12836 540 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 IL18R1Q13478 541 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 PTGES3Q15185 160 aaKnown RBP14.48□□□□□ -0.09
SS18-211ENST00000578954 SLX4IPQ5VYV7 408 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 PAQR6Q6TCH4 344 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 THSD4Q6ZMP0 1018 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 NANOGNBQ7Z5D8 188 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 ZNF555Q8NEP9 628 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 OR51A7Q8NH64 312 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 OR2V1Q8NHB1 315 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 ZNF417Q8TAU3 575 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 TEX47Q8TBZ9 253 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 SMPDL3BQ92485 455 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 SLC25A36Q96CQ1 311 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 WBP1Q96G27 269 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 ZNF587Q96SQ5 575 aaPredicted RBP14.48□□□□□ -0.09
SS18-211ENST00000578954 ASPNQ9BXN1 380 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 ANKRD60Q9BZ19 345 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 LDAHQ9H6V9 325 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 CHST11Q9NPF2 352 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 SPRR3Q9UBC9 169 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 B3GALT5Q9Y2C3 310 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 ZZEF1O43149 2961 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 A0A1W2PNV4 684 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 H3BN98 237 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 SULT2B1O00204 365 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 PLPP3O14495 311 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 BHLHE40O14503 412 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 TNFSF11O14788 317 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 DENRO43583 198 aaKnown RBP14.47□□□□□ -0.09
SS18-211ENST00000578954 OPN1LWP04000 364 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 HIST1H2ABP04908 130 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 SLC6A6P31641 620 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 GIPRP48546 466 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 RPL18Q07020 188 aaKnown RBP14.47□□□□□ -0.09
SS18-211ENST00000578954 PDSS1Q5T2R2 415 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 C6orf52Q5T4I8 152 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 C12orf73Q69YU5 71 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 C19orf48Q6RUI8 117 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 Q6ZPB1 254 aaPredicted RBP14.47□□□□□ -0.09
SS18-211ENST00000578954 H1FNTQ75WM6 255 aaPredicted RBP14.47□□□□□ -0.09
SS18-211ENST00000578954 HIST3H2AQ7L7L0 130 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 CHERPQ8IWX8 916 aaKnown RBP14.47□□□□□ -0.09
SS18-211ENST00000578954 OR52L1Q8NGH7 329 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 CYGBQ8WWM9 190 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 HIST1H2ACQ93077 130 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 SAMD8Q96LT4 415 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 TIMP4Q99727 224 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 TSSK6Q9BXA6 273 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 ENKD1Q9H0I2 346 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 TBC1D23Q9NUY8 699 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 PAQR5Q9NXK6 330 aaPredicted RBP14.47□□□□□ -0.09
SS18-211ENST00000578954 TAS2R5Q9NYW4 299 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 SEC14L4Q9UDX3 406 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 BAIAP2Q9UQB8 552 aa14.47□□□□□ -0.09
SS18-211ENST00000578954 LOC102725191A0A1B0GVB3 256 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 AQP7P3A6NL99 342 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 NPIPA5E9PKD4 350 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 H0YC42 278 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 EIF1AYO14602 144 aaKnown RBP14.46□□□□□ -0.09
SS18-211ENST00000578954 BCKDKO14874 412 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 EIF1BO60739 113 aaKnown RBP14.46□□□□□ -0.09
SS18-211ENST00000578954 APEHP13798 732 aaKnown RBP14.46□□□□□ -0.09
SS18-211ENST00000578954 GTF2E2P29084 291 aaKnown RBP14.46□□□□□ -0.09
SS18-211ENST00000578954 GGT2P36268 569 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 AQP2P41181 271 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 TPD52P55327 224 aaPredicted RBP14.46□□□□□ -0.09
SS18-211ENST00000578954 OR2B6P58173 313 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 KLRB1Q12918 225 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 PMS2P3Q13401 168 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 TAF11Q15544 211 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 PGGHGQ32M88 737 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 HBMQ6B0K9 141 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 SLC27A4Q6P1M0 643 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 PCSK4Q6UW60 755 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 FAM180AQ6UWF9 173 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 DPY19L2P2Q6ZN68 376 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 CCDC71Q8IV32 467 aaPredicted RBP14.46□□□□□ -0.09
SS18-211ENST00000578954 LNX2Q8N448 690 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 MEIOBQ8N635 442 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 OR2T33Q8NG76 320 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 OR4Q3Q8NH05 313 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 OR10D3Q8NH80 312 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 MOSPD2Q8NHP6 518 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 DNAJA3Q96EY1 480 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 WDYHV1Q96HA8 205 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 GPR137Q96N19 417 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 ZNF570Q96NI8 536 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 CNTNAP3BQ96NU0 1288 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 SRXN1Q9BYN0 137 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 CNTNAP3Q9BZ76 1288 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 NDEL1Q9GZM8 345 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 PRDM14Q9GZV8 571 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms