RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 Q96MT0 163 aa12.55□□□□□ -0.4
CSNK1D-209ENST00000578904 MUS81Q96NY9 551 aa12.55□□□□□ -0.4
CSNK1D-209ENST00000578904 YTHDF1Q9BYJ9 559 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-209ENST00000578904 TIGARQ9NQ88 270 aa12.55□□□□□ -0.4
CSNK1D-209ENST00000578904 BLOC1S6Q9UL45 172 aa12.55□□□□□ -0.4
CSNK1D-209ENST00000578904 IGSF10Q6WRI0 2623 aa12.55□□□□□ -0.4
CSNK1D-209ENST00000578904 KIAA1549Q9HCM3 1950 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 H3BML4 177 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 CDC42EP2O14613 210 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 EIF1BO60739 113 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 PTP4A3O75365 173 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 IFNGP01579 166 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 BGLAPP02818 100 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 RFPL3SP0C7P2 107 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 ASAH2BP0C7U1 165 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 PEPDP12955 493 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 NOS3P29474 1203 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 POLR2IP36954 125 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 MAGEA5P43359 124 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 LSM11P83369 360 aaKnown RBP eCLIP12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 CDK5Q00535 292 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 TEKQ02763 1124 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 PMS2P3Q13401 168 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 SGCBQ16585 318 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 TMEM176BQ3YBM2 270 aaPredicted RBP12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 RNFT1Q5M7Z0 435 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 DPY19L2P2Q6ZN68 376 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 PTCHD4Q6ZW05 846 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 SLC46A3Q7Z3Q1 461 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 OR5J2Q8NH18 312 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 SNRNP40Q96DI7 357 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 SAMD8Q96LT4 415 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 OR5B2Q96R09 309 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 GPA33Q99795 319 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 KLHDC3Q9BQ90 382 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 NAA11Q9BSU3 229 aaPredicted RBP12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 IFT27Q9BW83 186 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 TSPAN10Q9H1Z9 355 aaPredicted RBP12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 EGLN3Q9H6Z9 239 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 EXO5Q9H790 373 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 ACKR4Q9NPB9 350 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 ALKBH4Q9NXW9 302 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 MRPL39Q9NYK5 338 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 B3GALT5Q9Y2C3 310 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 HIF3AQ9Y2N7 669 aa12.54□□□□□ -0.4
CSNK1D-209ENST00000578904 DNAJC13O75165 2243 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 FLNBO75369 2602 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 ASH1LQ9NR48 2969 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 TRAV27A0A087WT01 109 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 B4DXG7 233 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 BLOC1S5-TXNDC5H3BN57 136 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 SULT2B1O00204 365 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 SEC14L5O43304 696 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 DNPH1O43598 174 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 PMS2P2O95744 297 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 ACTL6AO96019 429 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 PRB1P04280 392 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 POU3F2P20265 443 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 TCEA1P23193 301 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 GRK5P34947 590 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 OR2B6P58173 313 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 MYBPC1Q00872 1141 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 OR7A5Q15622 319 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 SNAPC1Q16533 368 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 ARHGAP11AQ6P4F7 1023 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 ESPNLQ6ZVH7 1005 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 H1FNTQ75WM6 255 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 YRDCQ86U90 279 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 MEX3DQ86XN8 651 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 KIF18BQ86Y91 864 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 OR8J1Q8NGP2 316 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 ZNF524Q96C55 264 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 KLHL15Q96M94 604 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 TNFRSF13CQ96RJ3 184 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 OR11A1Q9GZK7 315 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 LDAHQ9H6V9 325 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 CLN6Q9NWW5 311 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 PAQR5Q9NXK6 330 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 SCN3BQ9NY72 215 aa12.53□□□□□ -0.4
CSNK1D-209ENST00000578904 SPENQ96T58 3664 aaKnown RBP12.52□□□□□ -0.4
CSNK1D-209ENST00000578904 ZC3H12DA2A288 527 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 LIPT2A6NK58 231 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 RIIAD1A6NNX1 92 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 SHISA8B8ZZ34 492 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 NPIPA5E9PKD4 350 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 E9PQ18 207 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 IMPA2O14732 288 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 TNFAIP8O95379 198 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 TP53P04637 393 aaPredicted RBP12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 CELA3AP09093 270 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 GNAO1P09471 354 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 ADORA3P0DMS8 318 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 APEHP13798 732 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 PAICSP22234 425 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 SFTPDP35247 375 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 CHN2P52757 468 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 MLLT10P55197 1068 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 RPS3AP61247 264 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 RPS4XP62701 263 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 MYBPHQ13203 477 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms