RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 CDK20Q8IZL9 346 aa10.26□□□□□ -0.77
ERBB2-208ENST00000578630 RNF113BQ8IZP6 322 aaKnown RBP10.26□□□□□ -0.77
ERBB2-208ENST00000578630 SCAIQ8N9R8 606 aa10.26□□□□□ -0.77
ERBB2-208ENST00000578630 TMEM239Q8WW34 195 aa10.26□□□□□ -0.77
ERBB2-208ENST00000578630 ASB9Q96DX5 294 aa10.26□□□□□ -0.77
ERBB2-208ENST00000578630 SPOCK3Q9BQ16 436 aa10.26□□□□□ -0.77
ERBB2-208ENST00000578630 PRSS27Q9BQR3 290 aa10.26□□□□□ -0.77
ERBB2-208ENST00000578630 PTDSS2Q9BVG9 487 aa10.26□□□□□ -0.77
ERBB2-208ENST00000578630 OPN3Q9H1Y3 402 aaPredicted RBP10.26□□□□□ -0.77
ERBB2-208ENST00000578630 MMADHCQ9H3L0 296 aaPredicted RBP10.26□□□□□ -0.77
ERBB2-208ENST00000578630 C12orf49Q9H741 205 aa10.26□□□□□ -0.77
ERBB2-208ENST00000578630 NANSQ9NR45 359 aa10.26□□□□□ -0.77
ERBB2-208ENST00000578630 TENM4Q6N022 2769 aa10.26□□□□□ -0.77
ERBB2-208ENST00000578630 ZNF716A6NP11 495 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 CH25HO95992 272 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 IGF2P01344 180 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 COX6B1P14854 86 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 POU2F1P14859 743 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 ZNF43P17038 809 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 KLK2P20151 261 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 CBLP22681 906 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 GRNP28799 593 aaKnown RBP10.25□□□□□ -0.77
ERBB2-208ENST00000578630 GRPRP30550 384 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 PCYT1AP49585 367 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 MS4A2Q01362 244 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 IL1RL1Q01638 556 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 CHRNB3Q05901 458 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 TFF3Q07654 80 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 C1DQ13901 141 aaKnown RBP10.25□□□□□ -0.77
ERBB2-208ENST00000578630 SLC17A1Q14916 467 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 FAM98BQ52LJ0 330 aaKnown RBP10.25□□□□□ -0.77
ERBB2-208ENST00000578630 LCN8Q6JVE9 175 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 NUFIP2Q7Z417 695 aaKnown RBP10.25□□□□□ -0.77
ERBB2-208ENST00000578630 TSPYL5Q86VY4 417 aaPredicted RBP10.25□□□□□ -0.77
ERBB2-208ENST00000578630 OFCC1Q8IZS5 231 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 CCDC124Q96CT7 223 aaKnown RBP10.25□□□□□ -0.77
ERBB2-208ENST00000578630 CLPTM1LQ96KA5 538 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 C7orf34Q96L11 122 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 OXGR1Q96P68 337 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 ZNF300Q96RE9 604 aaPredicted RBP10.25□□□□□ -0.77
ERBB2-208ENST00000578630 ZNF347Q96SE7 839 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 ZNF426Q9BUY5 554 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 HDHD5Q9BXW7 423 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 ENKD1Q9H0I2 346 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 ANKRD19PQ9H560 264 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 FKRPQ9H9S5 495 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 NMNAT1Q9HAN9 279 aaPredicted RBP10.25□□□□□ -0.77
ERBB2-208ENST00000578630 IL1RAPQ9NPH3 570 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 MRPL39Q9NYK5 338 aaKnown RBP10.25□□□□□ -0.77
ERBB2-208ENST00000578630 NDUFAF4Q9P032 175 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 NDRG3Q9UGV2 375 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 ING1Q9UK53 422 aaPredicted RBP10.25□□□□□ -0.77
ERBB2-208ENST00000578630 V9GYQ6 96 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 KIAA1549Q9HCM3 1950 aa10.25□□□□□ -0.77
ERBB2-208ENST00000578630 LOC102725191A0A1B0GVB3 256 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 ZNF814B7Z6K7 855 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 C19orf84I3L1E1 186 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 J3KTA2 159 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 hCG_2039718K7EN88 272 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 M0R082 166 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 KPNA4O00629 521 aaPredicted RBP10.24□□□□□ -0.77
ERBB2-208ENST00000578630 HNRNPRO43390 633 aaKnown RBP10.24□□□□□ -0.77
ERBB2-208ENST00000578630 RAMP1O60894 148 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 CNOT4O95628 575 aaKnown RBP10.24□□□□□ -0.77
ERBB2-208ENST00000578630 BGLAPP02818 100 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 FABP3P05413 133 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 H1F0P07305 194 aaKnown RBP10.24□□□□□ -0.77
ERBB2-208ENST00000578630 UMPSP11172 480 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 HOXB6P17509 224 aaKnown RBP10.24□□□□□ -0.77
ERBB2-208ENST00000578630 FUT1P19526 365 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 AHCYP23526 432 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 COL8A1P27658 744 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 CD79BP40259 229 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 OR3A2P47893 321 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 LTBQ06643 244 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 POU4F3Q15319 338 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 ZNF74Q16587 644 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 EXOC3L2Q2M3D2 409 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 PGM2L1Q6PCE3 622 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 ZNF474Q6S9Z5 364 aaPredicted RBP10.24□□□□□ -0.77
ERBB2-208ENST00000578630 ZNF730Q6ZMV8 503 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 WDR88Q6ZMY6 472 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 MEX3BQ6ZN04 569 aaKnown RBP10.24□□□□□ -0.77
ERBB2-208ENST00000578630 AAED1Q7RTV5 226 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 DMRTC2Q8IXT2 367 aaPredicted RBP10.24□□□□□ -0.77
ERBB2-208ENST00000578630 ADPRHL1Q8NDY3 354 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 PIK3C3Q8NEB9 887 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 OR9K2Q8NGE7 335 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 OR5J2Q8NH18 312 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 ZNF417Q8TAU3 575 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 TMEM255BQ8WV15 326 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 ACOT11Q8WXI4 607 aaPredicted RBP10.24□□□□□ -0.77
ERBB2-208ENST00000578630 APH1AQ96BI3 265 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 SGTBQ96EQ0 304 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 ZNF587Q96SQ5 575 aaPredicted RBP10.24□□□□□ -0.77
ERBB2-208ENST00000578630 SEPHS2Q99611 448 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 PIP5K1AQ99755 562 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 MAGIXQ9H6Y5 334 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 RHCGQ9UBD6 479 aa10.24□□□□□ -0.77
ERBB2-208ENST00000578630 ZNF229Q9UJW7 825 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms